URL: http://geno3d-pbil.ibcp.fr
Proper Citation: GENO3D (RRID:SCR_003183)
Description: An automatic web server for protein molecular modelling. Starting with a query protein sequence, the server performs the homology modelling in six successive steps: (i) identify homologous proteins with known 3D structures by using PSI-BLAST; (ii) provide the user all potential templates through a very convenient user interface for target selection; (iii) perform the alignment of both query and subject sequences; (iv) extract geometrical restraints (dihedral angles and distances) for corresponding atoms between the query and the template; (v) perform the 3D construction of the protein by using a distance geometry approach and (vi) finally send the results by e-mail to the user. The strategy used in Geno3D is comparative protein structure modelling by spatial restraints (distances and dihedral) satisfaction.
Abbreviations: GENO3D
Resource Type: analysis service resource, data analysis service, production service resource, service resource
Defining Citation: PMID:11836238
Keywords: protein, molecular modeling, 3d model, homology, comparative protein structure modelling
Funding: Ministere de la recherche ; Programme Bioinformatique inter-EPST ; CNRS ; IMABIO ; COMI ; GENOME ; Region Rhone-Alpes
Availability: Free, Freely available
Resource Name: GENO3D
Resource ID: SCR_003183
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
