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Resource Name
SOAP
RRID:SCR_000689 RRID Copied      
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SOAP (RRID:SCR_000689)
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Resource Information

URL: http://soap.genomics.org.cn/

Proper Citation: SOAP (RRID:SCR_000689)

Description: Software package that provides full solution to next generation sequencing data analysis consisting of an alignment tool (SOAPaligner/soap2), a re-sequencing consensus sequence builder (SOAPsnp), an indel finder ( SOAPindel ), a structural variation scanner ( SOAPsv ), a de novo short reads assembler ( SOAPdenovo ), and a GPU-accelerated alignment tool for aligning short reads with a reference sequence. (SOAP3/GPU).

Abbreviations: SOAP,

Synonyms: SOAP: short oligonucleotide alignment program, Short Oligonucleotide Analysis Package

Resource Type: data processing software, software resource, software application

Defining Citation: PMID:18227114

Keywords: gene, genetic, genomic, next generation sequencing, alignment, short read, bio.tools

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This resource

lists

SOAPfusion

lists

SOAPfuse

lists

SOAPnuke

lists

GapCloser

is listed by

Genetic Analysis Software

is listed by

bio.tools

is listed by

Debian

has parent organization

BGI; Shenzhen; China

is parent organization of

SOAP3

is parent organization of

SOAPaligner/soap2

Usage and Citation Metrics

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Data and Source Information