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URL: http://www.poldracklab.org/software
Proper Citation: Poldracklab Portal (RRID:SCR_002712)
Description: The Poldrack lab has developed software tools for fMRI data analysis (links on the site), experimental design, and informatics, in collaboration with several other groups. * pubbrain.org: Developed in collaboration with the UCLA Consortium for Neuropsychiatric Phenomics, this site is an automatic meta-analytic search aid that allows for visualizing PubMed searches based on published neuroanatomic findings. * LONI Probabilistic Atlas: Developed in collaboration with the UCLA Laboratory of Neuroimaging and Center for Cognitive Phenomics, this project provides free and open access to a probabilistic atlas of cortical structures in 40 healthy individuals, including all raw data. * fmripower.org: Software developed by Jeanette Mumford in the Poldrack lab for statistical power analysis for fMRI studies. * Automated ICA-based denoising: Toolbox developed by Jussi Tohka at the Tampere University of Technology in Finland in collaboration with our laboratory and the UCLA Laboratory of Neuroimaging. * Raw data diagnostics - An R program that reads in a 4-D data file and provides a diagnostic report. * Code to run various tasks used in the lab - all of these require MATLAB and the MATLAB Psychophysics toolbox: * - Stop signal task (for behavioral testing outside the scanner) * - File Stop signal task (for use in the scanner) * - File mixed gambles task (demo and scanning script)
Synonyms: Poldracklab.org - Software projects
Resource Type: software resource, data or information resource, software application, atlas, data analysis software, source code, data processing software, data visualization software
Keywords: fmri data analysis, experimental design, informatics, fmri design optimization tools, data simulation, roi analysis for fsl, automatic meta-analytic search aid, neuroanatomic findings, probabilistic atlas, cortical structures, open access, raw data, statistical power analysis, fmri studies, automated ica-based denoising, synthetic datasets, wiki-based fmri data management system, scripts, tools for optimization, event-related fmri designs, data diagnostics, fsl, dti analysis package, maps of brain anatomic regions, power calculation tool, power analysis, roi (use region of interest), cognitive phenomics, neuropsychiatric phenomics
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