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URL: http://www.bussemakerlab.org/software/TranscriptionDetector/
Proper Citation: TranscriptionDetector (RRID:SCR_013561)
Description: THIS RESOURCE IS NO LONGER IN SERVICE, documented August 18, 2015. TranscriptionDetector is a tool for finding probes measuring significantly expressed loci in a genomic array experiment. TranscriptionDetector was originally created to analyze the transcriptome of Drosophila melanogaster. The study, a collaboration with Kevin White's Lab at Yale, is described in our 2004 Science paper. Later on, it has been elaborated and more recently presented in Gabor Halasz et al. in Genome Biol. 2006 July 19; 7(7):R59 The TranscriptionDetector algorithm requires that a set of negative control probes (NCPs) be included on each microarray used in the study. The significance of a data probe is evaluated relative to these NCPs, which represent non-specific binding.
Synonyms: Transcription Detector
Resource Type: software resource, data acquisition software, data processing software, software application
Defining Citation: PMID:16859498
Keywords: data acquisition, software, algorithm, negative control probe, NCP
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