Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes
Resource Name
FunGAP
RRID:SCR_023213 RRID Copied      
PDF Report How to cite
FunGAP (RRID:SCR_023213)
Copy Citation Copied
Resource Information

URL: https://github.com/CompSynBioLab-KoreaUniv/FunGAP

Proper Citation: FunGAP (RRID:SCR_023213)

Description: Software tool to predict protein coding genes in fungal genome assembly. Performs gene prediction on given genome assembly and RNA-seq reads. Runs multiple gene predictors, evaluates all predicted genes, and assembles gene models that are highly supported by homology to known sequences.

Abbreviations: FunGAP

Synonyms: Fungal Genome Annotation Pipeline

Resource Type: software application, simulation software, software resource

Defining Citation: PMID:28582481

Keywords: Genome annotation, predict protein-coding genes, fungal genome assembly, RNA-seq reads, gene prediction

Expand All
Usage and Citation Metrics

We found {{ ctrl2.mentions.all_count }} mentions in open access literature.

We have not found any literature mentions for this resource.

We are searching literature mentions for this resource.

Most recent articles:

{{ mention._source.dc.creators[0].familyName }} {{ mention._source.dc.creators[0].initials }}, et al. ({{ mention._source.dc.publicationYear }}) {{ mention._source.dc.title }} {{ mention._source.dc.publishers[0].name }}, {{ mention._source.dc.publishers[0].volume }}({{ mention._source.dc.publishers[0].issue }}), {{ mention._source.dc.publishers[0].pagination }}. (PMID:{{ mention._id.replace('PMID:', '') }})

Checkfor all resource mentions.

Collaborator Network

A list of researchers who have used the resource and an author search tool

Find mentions based on location


{{ ctrl2.mentions.errors.location }}

A list of researchers who have used the resource and an author search tool. This is available for resources that have literature mentions.

Ratings and Alerts

No rating or validation information has been found for FunGAP.

No alerts have been found for FunGAP.

Data and Source Information