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URL: https://github.com/single-cell-genetics/cellsnp-lite
Proper Citation: Cellsnp-lite (RRID:SCR_025515)
Description: Software C/C++ tool for efficient genotyping bi-allelic SNPs on single cells. You can use cellsnp-lite after read alignment to obtain the snp x cell pileup UMI or read count matrices for each alleles of given or detected SNPs.
Resource Type: software application, software resource, source code
Defining Citation: PMID:33963851
Keywords: C, C++, genotyping bi-allelic SNPs on single cells, after read alignment,
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