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URL: http://bioconductor.org/packages/release/bioc/html/CorMut.html
Proper Citation: CorMut (RRID:SCR_000053)
Description: THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 16,2023. Software package for computing correlated mutations based on selection pressure. Three methods are provided for detecting correlated mutations, including conditional selection pressure, mutual information and Jaccard index. The computation consists of two steps: First, the positive selection sites are detected; second, the mutation correlations are computed among the positive selection sites. Note that the first step is optional. Meanwhile, CorMut facilitates the comparison of the correlated mutations between two conditions by the means of correlated mutation network.
Synonyms: CorMut - Detect the correlated mutations based on selection pressure
Resource Type: software resource, software application, sequence analysis software, data analysis software, data processing software
Defining Citation: PMID:24681904
Keywords: sequencing, correlated mutation, selection pressure, r, bio.tools
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