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Resource Name
Skylign
RRID:SCR_001176 RRID Copied      
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Skylign (RRID:SCR_001176)
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Resource Information

URL: http://skylign.org/

Proper Citation: Skylign (RRID:SCR_001176)

Description: A tool for creating logos representing both sequence alignments and profile hidden Markov models. The interactive logos enable scrolling, zooming, and inspection of underlying values. Skylign can avoid sampling bias in sequence alignments by down-weighting redundant sequences and by combining observed counts with informed priors. It also simplifies the representation of gap parameters, and can optionally scale letter heights based on alternate calculations of the conservation of a position.

Abbreviations: Skylign

Synonyms: Skylign - Interactive logos for alignments and profile HMMs

Resource Type: software resource, analysis service resource, service resource, production service resource, data analysis service

Defining Citation: PMID:24410852

Keywords: sequence alignment, profile, logo, bio.tools

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This resource

is listed by

OMICtools

is listed by

bio.tools

is listed by

Debian

has parent organization

Janelia Research

Usage and Citation Metrics

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Data and Source Information