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URL: http://sourceforge.net/apps/mediawiki/breakway/index.php
Proper Citation: Breakway (RRID:SCR_001180)
Description: A suite of software programs that take aligned genomic data and report structural variation breakpoints. Features include: * Takes in BAM formatted input, the current standard for genomic alignments. * Compatible with standard output from major alignment algorithms such as BFAST, BWA, MAQ, et cetera. * Capable of analyzing data from any major platform--Solexa, SOLiD, 454, et cetera. * Empirically identifies structural variation breakpoints. * Highly specific analysis generates very few false positives. * Includes a suite of downstream tools for annotating identified breakpoints and reducing false positives.
Abbreviations: Breakway
Synonyms: Breakway: Identify Structural Variations in Genomic Data
Resource Type: software resource
Defining Citation: PMID:20126413
Keywords: genome, structural variation, breakpoint
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