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URL: http://genomics1.mh-hannover.de/genometa/index.php?Site=Home
Proper Citation: Genometa (RRID:SCR_001181)
Description: A Java based bioinformatics program which allows rapid analysis of metagenomic short read datasets. Millions of short reads can be accurately analysed within minutes and visualised in the browser component. A large database of diverse bacteria and archaea has been constructed as a reference sequence. The approach is based upon the established open source visualisation tool IGB and supported by the rapid alignment program bowtie. The Picard toolset for SAM files is also made use of.
Abbreviations: Genometa
Synonyms: Genometa - Rapid analysis of metagenomic short reads
Resource Type: software resource
Defining Citation: PMID:22927906
Keywords: metagenomic, classify, windows, linux, java, bio.tools, bio.tools
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