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Proper Citation: Chilibot: Gene and Protein relationships from MEDLINE (RRID:SCR_001705)
Description: Data analysis service that searches PubMed literature database (abstracts) about specific relationships between proteins, genes, or keywords using a NLP-based text-mining approach. The results are returned as a graph. The synonym database used in Chilibot is available, without fee, for academic use only. Several different search methods are supported including: * searching for relationship between two genes, proteins or keywords * searching for relationships between many genes, proteins, or keywords * searching for relationships between two lists of genes, proteins, or keywords Advanced options include: * Automated hypothesis generation (graph) * Restricting context using keywords * Providing your own synonyms * Modifying synonyms provided by Chilibot * Color coding nodes with gene expression values * Special search: modulation
Abbreviations: Chilibot
Synonyms: Chilibot - Mining PubMed for relationships
Resource Type: data or information resource, analysis service resource, service resource, production service resource, database, data analysis service
Defining Citation: PMID:15473905
Keywords: drug, gene, literature, natural language processing, protein, text-mining, network, keyword, biological concept, graph, bio.tools
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Source: SciCrunch Registry
