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Resource Name
Phenoscape Knowledgebase
RRID:SCR_002821 RRID Copied      
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Phenoscape Knowledgebase (RRID:SCR_002821)
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Resource Information

URL: http://kb.phenoscape.org/

Proper Citation: Phenoscape Knowledgebase (RRID:SCR_002821)

Description: Knowledgebase that uses ontologies to integrate phenotypic data from genetic studies of zebrafish with evolutionary variable phenotypes from the systematic literature of ostariophysan fishes. Users can explore the data by searching for anatomical terms, taxa, or gene names. The expert system enables the broad scale analysis of phenotypic variation across taxa and the co-analysis of these evolutionarily variable features with the phenotypic mutants of model organisms. The Knowledgebase currently contains 565,158 phenotype statements about 2,527 taxa, sourced from 57 publications, as well as 38,189 phenotype statements about 4,727 genes, retrieved from ZFIN. 2013-01-26.

Abbreviations: Phenoscape Knowledgebase

Resource Type: data or information resource, database

Defining Citation: PMID:22736877, PMID:20505755

Keywords: fish, gene, anatomy, model organism, ostariophysan, phenotype, taxis, ontology, anatomy, variation, taxon, genetic, evolution, development, web service, source code

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This resource

uses

Teleost Anatomy Ontology

is related to

Zebrafish Information Network (ZFIN)

is related to

Catalog of Fishes

is related to

FishBase

is related to

AmphibiaWeb

is related to

NCBI Taxonomy

is related to

Catalogue of Life

has parent organization

NESCent - National Evolutionary Synthesis Center

has parent organization

Phenoscape

is parent organization of

Teleost Taxonomy Ontology

Usage and Citation Metrics

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Data and Source Information