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URL: http://genome.ucsc.edu/cgi-bin/hgPcr?command=start
Proper Citation: In-Silico PCR (RRID:SCR_003089)
Description: Tool that searches a sequence database with a pair of PCR primers, using an indexing strategy for fast performance. When successful, the search returns a sequence output file in fasta format containing all sequence in the database that lie between and include the primer pair. The fasta header describes the region in the database and the primers. The fasta body is capitalized in areas where the primer sequence matches the database sequence and in lower-case elsewhere. Sources and executables to run batch jobs on your own server are available free for academic, personal, and non-profit purposes. Non-exclusive commercial licenses are also available.
Abbreviations: In-Silico PCR
Synonyms: UCSC In-Silico PCR
Resource Type: software resource, analysis service resource, service resource, production service resource, data analysis service
Keywords: pcr primer, polymerase chain reaction, primer
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