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URL: http://geno3d-pbil.ibcp.fr
Proper Citation: GENO3D (RRID:SCR_003183)
Description: An automatic web server for protein molecular modelling. Starting with a query protein sequence, the server performs the homology modelling in six successive steps: (i) identify homologous proteins with known 3D structures by using PSI-BLAST; (ii) provide the user all potential templates through a very convenient user interface for target selection; (iii) perform the alignment of both query and subject sequences; (iv) extract geometrical restraints (dihedral angles and distances) for corresponding atoms between the query and the template; (v) perform the 3D construction of the protein by using a distance geometry approach and (vi) finally send the results by e-mail to the user. The strategy used in Geno3D is comparative protein structure modelling by spatial restraints (distances and dihedral) satisfaction.
Abbreviations: GENO3D
Resource Type: service resource, analysis service resource, production service resource, data analysis service
Defining Citation: PMID:11836238
Keywords: protein, molecular modeling, 3d model, homology, comparative protein structure modelling
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