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URL: http://linux1.softberry.com/berry.phtml?topic=plantprom&group=data&subgroup=plantprom
Proper Citation: PlantProm DB (RRID:SCR_003359)
Description: Annotated, non-redundant database of proximal promoter sequences for RNA polymerase II with experimentally determined transcription start site(s) (TSS) from various plant species. It contains 578 unrelated entries including 151, 396 and 31 promoters with experimentally verified TSS from monocot, dicot and other plants, respectively (April 2014). This DB presents the published promoter sequences with TSS(s) determined by direct experimental approaches and therefore serves as the most accurate source for development of computational promoter prediction tools.
Abbreviations: PlantProm
Synonyms: Plant Promoter Database, PlantProm DB
Resource Type: data or information resource, database
Defining Citation: PMID:12519961
Keywords: proximal promoter sequence, rna polymerase ii, transcription start site, promoter, monocot, dicot, dna sequence, taxonomy, promoter type, nucleotide frequency matrix, nucleotide composition, motif, transcription, regulatory element
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