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Proper Citation: Standards-based Infrastructure with Distributed Resources (RRID:SCR_004532)
Description: A searchable public data repository for multi-assay studies in the field of high-throughput biology. Studies are annotated and curated using ontologies and controlled vocabularies according to the recommendations of the OBO foundry (Open Biological and Biomedical Ontologies) and the NCBO bioportal. Each data set is assigned a digital object identifier (DOI) provided by DataCite. In addition, the SIDR team has developed an ISA-XML (ISA-ML) version of the ISA-TAB format and the mapping to the FuGE object model (ISA-TABtoFuGE); these improvements should facilitate further tool integration, including web services. SIDR contributes to the proof-of-concept addressing the critical success factor for data integration. The SIDR team will continue to put in place the building blocks for giving access to interoperable data through a world-wide network of national hubs in the context of the community-based ISA infrastructure.
Abbreviations: SIDR
Resource Type: data or information resource, storage service resource, service resource, database, data repository
Keywords: standards-based database, metadata standard, digital object identifier, assay, high-throughput, interoperability, data sharing, standardization, multi-omics
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