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URL: http://www.well.ox.ac.uk/~kgaulton/chaos.shtml
Proper Citation: CHAoS (RRID:SCR_005174)
Description: A Perl-based system for annotation of variants identified in high-throughput sequencing experiments. Functionality includes annotation of variants with information relating to population genetics, known transcripts, positional records, and sequence motif-based prediction. In addition, annotated variants can be summarized and extracted to facilitate downstream analysis. There is also basic support for gene-based biological annotation, and eventually will include tools for variant and genotype analysis and visualization.
Abbreviations: CHAoS
Synonyms: chaos - Annotation analysis and visualization of variants from high-throughput sequencing experiments
Resource Type: software resource
Keywords: annotation, analysis, visualization, variant, high-throughput sequencing, perl, population genetic, transcript, positional record, sequence, motif, genotype
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