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URL: http://bioinformatics.charite.de/supersite
Proper Citation: SuperSite (RRID:SCR_005293)
Description: An encyclopedia that is dedicated to a ligand and binding site oriented view of the protein structural space. SuperSite integrates evolutionary information in the proteins as well as predicted binding sites from LigsiteCSC. A point set match algorithm is implemented that allows to screen the surface of a protein for the occurrence of possible binding sites as well as a similarity screen for similar compounds based on fingerprints. SuperSite allows users to discover the ligand space of the PDB, check for evolutionary conservation of residues using HSSP files, display possible binding sites of proteins via the LigsiteCSC algorithm, similarity screen for ligands contained in the SuperSite, and screen a protein for the possible similarity of binding pockets towards certain known drug binding sites.
Synonyms: SuperSite
Resource Type: data or information resource, database
Keywords: binding site, ligand, protein structure
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Source: SciCrunch Registry
