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URL: http://sourceforge.net/projects/netclassr/
Proper Citation: netClass (RRID:SCR_005672)
Description: An R package for network-based feature (gene) selection for biomarkers discovery via integrating biological information. The package adapts the following 5 algorithms for classifying and predicting gene expression data using prior knowledge: # average gene expression of pathway (aep); # pathway activities classification (PAC); # Hub network classification (hubc); # filter via top ranked genes (FrSVM); # network smoothed t-statistic (stSVM).
Abbreviations: netClass
Resource Type: software resource
Defining Citation: PMID:24443376
Keywords: protein-protein interaction network, biomarker discovery, classification, micoarray, gene expression profile, protein-protein interaction, gene expression, gene, biomarker
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