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URL: http://bioconductor.org/packages/devel/bioc/html/SeqGSEA.html
Proper Citation: SeqGSEA (RRID:SCR_005724)
Description: Software package that provides methods for gene set enrichment analysis of high-throughput RNA-Seq data by integrating differential expression and splicing. It uses negative binomial distribution to model read count data, which accounts for sequencing biases and biological variation. Based on permutation tests, statistical significance can also be achieved regarding each gene''s differential expression and splicing, respectively.
Abbreviations: SeqGSEA
Synonyms: SeqGSEA - Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing
Resource Type: data analysis software, software resource, data processing software, software application
Keywords: differential expression, gene expression, gene set enrichment, rna-seq, sequencing, splicing
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