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URL: http://sourceforge.net/projects/cohcap/
Proper Citation: COHCAP (RRID:SCR_006499)
Description: An algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). It provides QC metrics, differential methylation for CpG Sites, differential methylation for CpG Islands, integration with gene expression data, and visualization of methylation values.
Abbreviations: COHCAP
Synonyms: City of Hope CpG Island Analysis Pipeline, COHCAP - City of Hope CpG Island Analysis Pipeline
Resource Type: software resource
Defining Citation: PMID:23598999
Keywords: java, perl, s/r, java swing, bio.tools
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