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URL: http://unite.ut.ee/index.php
Proper Citation: UNITE (RRID:SCR_006518)
Description: A fungal rDNA internal transcribed spacer (ITS) sequence database (although additional genes and genetic markers are also welcome) to facilitate identification of environmental samples of fungal DNA. Additional important features include user annotation of INSD sequences to add metadata on, e.g., locality, habitat, soil, climate, and interacting taxa. The user can furthermore annotate INSD sequences with additional species identifications that will appear in the results of any analyses done. UNITE focuses on high-quality ITS sequences generated from fruiting bodies collected and identified by experts and deposited in public herbaria. In addition, it also holds all fungal ITS sequences in the International Nucleotide Sequence Databases (INSD: NCBI, EMBL, DDBJ). Both sets of sequences may be used in any analyses carried out. UNITE is accompanied by a project management system called PlutoF, where users can store field data, document the sequencing lab procedures, manage sequences, and make analyses. PlutoF intends to make it possible for taxonomists, ecologists, and biogeographers to use a common platform for data storage, handling, and analyses, with the intent of facilitating an integration of these disciplines. A user can have an unlimited number of projects but still make analyses across any project data available to him.
Abbreviations: UNITE
Synonyms: unite: A molecular database for the identification of fungi
Resource Type: data or information resource, data analysis service, storage service resource, analysis service resource, service resource, production service resource, database, data repository
Defining Citation: PMID:20409185, PMID:15869663
Keywords: sequence, barcoding sequence, internal transcribed spacer sequence, rdna, gene, genetic marker, internal transcribed spacer, dna, FASEB list
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