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URL: http://compbio.bccrc.ca/software/mutationseq/
Proper Citation: mutationSeq (RRID:SCR_006815)
Description: A software suite using feature-based classifiers for somatic mutation prediction from paired tumour/normal next-generation sequencing data. mutationSeq has the advantages of integrating different features (e.g., base qualities, mapping qualities, strand bias, and tailed distance features), and validated somatic mutations to make predictions. Given paired normal/tumour bam files, mutationSeq will output the probability of each candidate site being somatic.
Abbreviations: mutationSeq
Resource Type: software resource
Defining Citation: PMID:22084253
Keywords: next-generation sequencing, somatic mutation, tumor, normal
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