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URL: http://sourceforge.net/projects/quasr/
Proper Citation: QUASR (RRID:SCR_006820)
Description: A lightweight software pipeline written to process and analyse next-generation sequencing (NGS) data from Illumina, 454, and Ion Torrent platforms. Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal, demultiplexing, primer-removal, quality-assurance (QA) graphing, quality control (QC), consensus-generation, minority-variant determination, minority-variant graphing.
Abbreviations: QUASR
Synonyms: QUASR - Cross-platform NGS processing and analysis pipeline in Python
Resource Type: software resource
Keywords: next generation sequencing, python3, java
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