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Resource Name
IMGT/LIGM-DB
RRID:SCR_006931 RRID Copied      
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IMGT/LIGM-DB (RRID:SCR_006931)
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Resource Information

URL: http://www.imgt.org/IMGTindex/LIGM.html

Proper Citation: IMGT/LIGM-DB (RRID:SCR_006931)

Description: IMGT/LIGM-DB is a comprehensive database of immunoglobulin (IG) and T cell receptor (TR) nucleotide sequences from human and other vertebrate species (270). IMGT/LIGM-DB includes all germline (non-rearranged) and rearranged IG and TR genomic DNA (gDNA) and complementary DNA (cDNA) sequences published in generalist databases. IMGT/LIGM-DB allows searches from the Web interface according to biological and immunogenetic criteria through five distinct modules depending on the user interest. Users can search the catalogue by accession number, mnemonic, definition, creation date, length, or annotation level. They also have the option to search through taxonomic classification, keywords, and annotated labels. For a given entry, nine types of display are available including the IMGT flat file, the translation of the coding regions and the analysis by the IMGT/V-QUEST tool (see parent org. below). IMGT/LIGM-DB distributes expertly annotated sequences. The annotations hugely enhance the quality and the accuracy of the distributed detailed information. They include the sequence identification, the gene and allele classification, the constitutive and specific motif description, the codon and amino acid numbering, and the sequence obtaining information, according to the main concepts of IMGT-ONTOLOGY. They represent the main source of IG and TR gene and allele knowledge stored in IMGT/GENE-DB and in the IMGT reference directory.

Abbreviations: IMGT LIGM, IMGT/LIGM

Synonyms: IMGT LIGM, IMGT/LIGM, ImMunoGeneTics/Laboratoire d''ImmunoGenetique Moleculaire-Database

Resource Type: data or information resource, database

Defining Citation: PMID:16381979

Keywords: nucleotide sequence, gold standard or authority, bio.tools

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bio.tools

has parent organization

IMGT - the international ImMunoGeneTics information system

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Data and Source Information