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URL: http://weizhong-lab.ucsd.edu/cd-hit-otu/
Proper Citation: CD-HIT-OTU (RRID:SCR_006983)
Description: Data analysis service and software program that perform Operantional Taxonomic Units (OTUs) finding. It uses a three-step clustering for identifying OTUs. The first-step clustering is raw read filtering and trimming. The second step is error-free reads picking.. At the last step, OTU clustering is done at different distanct cutoffs (0.01, 0.02, 0.03... 0.12).
Abbreviations: CD-HIT-OTU
Resource Type: software resource
Defining Citation: PMID:22772836, PMID:21899761
Keywords: 454, read, illumina, rrna, fasta, metagenome, sequence, clustering, metagenomics, next-generation sequencing, protein
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Source: SciCrunch Registry
