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URL: http://tmbeta-genome.cbrc.jp/TMFunction/
Proper Citation: TM Function Database (RRID:SCR_007058)
Description: A database of functional residues in alpha-helical and beta-barrel membrane proteins. Each protein is identified with its name and source alongwith the Uniprot code. The protein data bank (PDB) codes are also given for available proteins. Different methods and experimental parameters, for example, affinity, dissociation constant, IC50, activity etc. are given in the database. Further, the database provides the numerical experimental value for each residue (or mutant) in a protein. The experimental data are collected from the literature both by searching the journals as well as with the keyword search at PUBMED. In addition, complete reference is given with journal citation and PMID number. TNFunction is cross-linked with the sequence database, Uniprot, structural database, PDB, and literature database, PubMed. The WWW interface enables users to search data based on various terms with different display options for outputs.
Synonyms: TMFunction Database
Resource Type: data or information resource, database
Keywords: functional residue, active sites, binding affinity, dissociation constant, membrane protein, protein data bank, protein sequence database, protein sequence motif, protein uniprot, sequence structure function relationship of membrane proteins, maximal velocity of transport
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National Institute of Advanced Industrial Science and Technology |
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