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URL: http://vortex.cs.wayne.edu/projects.htm#OE2GO
Proper Citation: Onto-Express To Go (OE2GO) (RRID:SCR_008854)
Description: Onto-Express is a web-based tool in the Onto-Tools suite that performs automated function profiling for a list of differentially expressed genes. However, Onto-Express does not support functional profiling for the organisms that do not have annotations in public domain, or use of custom (i.e. user-defined) ontologies. This limitation is also true for most of the other existing tools for functional profiling, which means that researchers working with uncommon organisms and/or new annotations or ontologies may be forced to construct such profiles manually. Onto-Express To Go (OE2GO) is a new tool added to the Onto-Tools ensemble to address these issues. OE2GO is built on top of OE to leverage its existing functionality. In OE2GO, the users now have an option to use either the Onto-Tools database as a source of functional annotations or provide their own annotations in a separate file. Currently, OE2GO supports annotation file in the Gene Ontology format. Platform: Online tool, Windows compatible, Mac OS X compatible, Linux compatible, Unix compatible
Abbreviations: OE2GO
Synonyms: Onto-Express-to-go, Onto-Express To Go
Resource Type: software resource, data analysis service, software application, analysis service resource, service resource, production service resource, text-mining software
Defining Citation: PMID:17584796
Keywords: gene, gene expression, annotation, data mining, ontology browser, annotation browser, ontology search engine, annotation search engine, ontology visualization, annotation visualization, statistical analysis, term enrichment, browser, visualization, search engine
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