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URL: http://svdetect.sourceforge.net/Site/Home.html
Proper Citation: SVDetect (RRID:SCR_010812)
Description: Software application for the isolation and the type prediction of intra- and inter-chromosomal rearrangements from paired-end/mate-pair sequencing data provided by the high-throughput sequencing technologies. This tool aims to identify structural variations with both clustering and sliding-window strategies, and helping in their visualization at the genome scale. It is compatible with SOLiD and Illumina (>=1.3) reads.
Abbreviations: SVDetect
Synonyms: SVDetect: a tool to detect genomic structural variations from paired-end and mate-pair sequencing data
Resource Type: software resource
Defining Citation: PMID:20639544
Keywords: structural variation, sequencing, chromosomal rearrangement, high-throughput sequencing, solid, illumina, genome, insertion, deletion, inversion, duplication, translocation, command-line, perl, bio.tools
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