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URL: http://bis.zju.edu.cn/pnatdb/
Proper Citation: PlantNATsDB - Plant Natural Antisense Transcripts DataBase (RRID:SCR_013278)
Description: Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources involving approximately 2 million NAT pairs in 69 plant species. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs. GO annotation and high-throughput small RNA sequencing data currently available were integrated to investigate the biological function of NATs. A ''''Gene Set Analysis'''' module based on GO annotation was designed to dig out the statistical significantly overrepresented GO categories from the specific NAT network. PlantNATsDB is currently the most comprehensive resource of NATs in the plant kingdom, which can serve as a reference database to investigate the regulatory function of NATs.
Abbreviations: PlantNATsDB
Synonyms: Plant Natural Antisense Transcripts DataBase
Resource Type: data or information resource, analysis service resource, service resource, production service resource, database, data analysis service
Defining Citation: PMID:22058132
Keywords: natural antisense transcript, annotation, high-throughput, small rna sequencing, function, regulatory function, predict, sequence, small rna, blast, bio.tools
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