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URL: https://github.com/fbreitwieser/pavian
Proper Citation: Pavian (RRID:SCR_016679)
Description: Software R package for interactive analysis of metagenomics classification results with a special focus on infectious disease diagnosis. Used for analyzing and visualization of metagenomics classification results from classifiers such as Kraken, Centrifuge and MetaPhlAn. Provides an alignment viewer for validation of matches to a particular genome.
Resource Type: software resource, analysis service resource, service resource, production service resource, web application, data analysis service
Defining Citation: DOI:10.1101/084715
Keywords: interactive, analysis, metagenomics, classification, result, infectious, disease, diagnosis, data, visualization, bio.tools
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