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Resource Name
CCTOP
RRID:SCR_016963 RRID Copied      
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CCTOP (RRID:SCR_016963)
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Resource Information

URL: http://cctop.enzim.ttk.mta.hu/

Proper Citation: CCTOP (RRID:SCR_016963)

Description: Web application providing transmembrane topology prediction. Server incorporates topology information from existing experimental and computational sources using the probabilistic framework of hidden Markov model. Provides the option to precede the topology prediction with signal peptide prediction and transmembrane globular protein discrimination. Given the amino acid sequence of a putative α helical transmembrane protein, CCTOP predicts its topology i.e. localization of membrane spanning regions and orientation of segments between them.

Abbreviations: CCTOP

Synonyms: CCTOP, Consensus Constrained TOPology

Resource Type: software resource, data access protocol, web service, analysis service resource, service resource, production service resource

Defining Citation: PMID:25943549

Keywords: transmembrane, topology, prediction, signal, peptide, globular, protein, discrimination, amino, acid, sequence, region, orientation, segment, bio.tools

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This resource

is listed by

Debian

is listed by

bio.tools

works with

PDBTM

works with

Topology Data Bank of Transmembrane Proteins

works with

TopDom

Usage and Citation Metrics

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Data and Source Information