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Resource Name
shovill
RRID:SCR_017077 RRID Copied      
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shovill (RRID:SCR_017077)
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Resource Information

URL: https://github.com/tseemann/shovill

Proper Citation: shovill (RRID:SCR_017077)

Description: Software tool to assemble bacterial isolate genomes from Illumina paired end reads. Used for isolate data only, primarily small haploid organisms. Supports assemblers like SKESA, Velvet and Megahit.

Resource Type: software resource, software application, sequence analysis software, data analysis software, data processing software

Keywords: assembly, bacteria, isolate, genome, Illumina, paired, end, read, data, haploid, organism, bio.tools

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This resource

uses

SPAdes

is listed by

Debian

is listed by

bio.tools

is related to

Trimmomatic

is related to

SAMTOOLS

is related to

BWA

is related to

FLASH

is related to

Velvet

is related to

Pilon

Usage and Citation Metrics

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Data and Source Information