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URL: https://github.com/santeripuranen/SuperDCA
Proper Citation: SuperDCA (RRID:SCR_018175)
Description: Software tool for global direct coupling analysis of input genome alignments. Implements variant of pseudolikelihood maximization direct coupling analysis, with emphasis on optimizations that enable its use on genome scale. May be used to discover co evolving pairs of loci.Used for genome wide epistasis analysis.
Synonyms: Super Direct Coupling Analysis
Resource Type: data analysis software, software resource, data processing software, software application
Defining Citation: PMID:29813016
Keywords: Protein, sequence, alignment, analysis, genome, loci, epistasis
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