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URL: https://rth.dk/resources/risearch/
Proper Citation: RIsearch (RRID:SCR_023503)
Description: Software tool for prediction of RNA–RNA, RNA–DNA, and DNA–DNA interactions. Both RIsearch1 and RIsearch2 enable quick localisation of potential near complementary interactions between given query and target sequences. RIsearch1 performs computation with whole sequences. RIsearch2 focuses on perfect complementary seed regions and extends them on both ends. User defined seed and extension constraints makes RIsearch2 applicable to all kinds of interaction predictions (e.g., siRNA and Cas9–gRNA off-target predictions).
Synonyms: RIsearch2, RIsearch1
Resource Type: software application, simulation software, software resource
Defining Citation: PMID:22923300, PMID:28108657
Keywords: interaction predictions, RNA–RNA interactions, RNA–DNA interactions, DNA–DNA interactions,
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Source: SciCrunch Registry
