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URL: https://github.com/AstraZeneca-NGS/VarDictJava
Proper Citation: VarDict (RRID:SCR_023658)
Description: Software tool as variant caller for both single and paired sample variant calling from BAM files. Implements amplicon bias aware variant calling from targeted sequencing experiments, rescue of long indels by realigning bwa soft clipped reads.Novel and versatile variant caller for next generation sequencing in cancer research.
Resource Type: software application, software resource
Defining Citation: PMID:27060149
Keywords: variant caller, BAM files, amplicon bias aware variant calling, sequencing experiments, next generation sequencing, long indels,
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