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URL: https://github.com/JustinChu/ntsm
Proper Citation: ntsm (RRID:SCR_024994)
Description: Software alignment free, ultra low coverage, sequencing technology agnostic, intraspecies sample comparison tool for sample swap detection. Used to count number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to compute the probability that sample are of the same origin to discover incongruent samples or sample swaps.
Synonyms: ntsm: nucleotide sequence sample matcher
Resource Type: source code, software application, software resource
Defining Citation: DOI:10.1101/2023.11.01.565041
Keywords: intraspecies sample comparison, sample comparison, specific k-mers within sequence data count, sample swap detection,
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