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URL: https://github.com/vgl-hub/gfastats
Proper Citation: gfastats (RRID:SCR_026368)
Description: Standalone tool to compute assembly summary statistics and manipulate assembly sequences in FASTA, FASTQ or GFA [.gz] format. Gfastats stores assembly sequences internally in a GFA-like format. This feature allows gfastats to seamlessly convert FAST* to and from GFA [.gz] files. Gfastats can also build an assembly graph that can in turn be used to manipulate the underlying sequences following instructions provided by the user, while simultaneously generating key metrics for the new sequences.
Resource Type: source code, software resource
Defining Citation: PMID:35799367
Keywords: summary statistics, genome assembly file manipulation, fasta, fastq, gfa, file conversion,
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Source: SciCrunch Registry
