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URL: https://github.com/steineggerlab/foldseek
Proper Citation: Foldseek (RRID:SCR_027018)
Description: Software tool for fast and sensitive comparisons of large structure sets. Used for comparisons of large protein structure sets, supporting monomer and multimer searches, as well as clustering. It runs on CPU, supports GPU acceleration for faster searches, and optionally allows ultra-fast and sensitive comparisons directly from protein sequence inputs using a language model, bypassing the need for structures.
Resource Type: source code, software application, software resource
Keywords: comparisons of large structure sets, protein structure sets, monomer and multimer searches, clustering
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