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Resource Name
NanoporeDB
RRID:SCR_028466 RRID Copied      
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NanoporeDB (RRID:SCR_028466)
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Resource Information

URL: https://db.genomics.cn/nanopore/

Proper Citation: NanoporeDB (RRID:SCR_028466)

Description: Open-access structural database dedicated to the exploration, analysis, and design of protein nanopores, which serve as essential molecular gateways in biological membranes and form the basis of many advanced biosensing and sequencing technologies. This platform integrates large-scale structure-guided mining and deep learning-based modeling using AlphaFold-Multimer and AlphaFold3 to provide high-confidence multimeric nanopore structures. Each entry includes detailed information on membrane embedding, pore geometry annotation, and constriction profiling to support functional and biophysical interpretation.

Resource Type: data or information resource, database

Defining Citation: DOI:10.1101/2025.11.25.690617

Keywords: Protein nanopore, single-molecule sensing, AlphaFold, protein structure prediction, transmembrane pore geometry

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