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Cellosaurus is database indexing available cell lines from various collections: American Type Culture Collection (ATCC), Bioresource Collection and Research Center, Taiwan (BCRC), Banco de Células do Rio de Janeiro (BCRJ), CellBank Australia (CBA), Collection of Cell Lines in Veterinary Medicine (CCLV), Cell Lines Service (CLS), Coriell, Drosophila Genomics Resource Center (DGRC), Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSMZ), European Bank for induced pluripotent Stem Cells (EBiSC), European Collection of Authenticated Cell Cultures (ECACC), Interlab Cell Line Collection (ICLC), Institute for Fermentation Osaka (IFO), Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) biobank, Japanese Collection of Research Bioresources (JCRB) Cell Bank, Kunming Cell Bank of Type Culture Collection (KCB), Korean Cell Line Bank (KCLB), Millipore, National Cell Bank of Iran (NCBI_Iran), National Cancer Institute - Developmental Therapeutics Program (NCI-DTP), NINDS Human Cell and Data Repository (NHCDR), NIH AIDS Reagent Program (NIH-ARP), NISES, RIKEN Bioresource Center Cell Bank (RCB), Royan Stem Cell Bank (RSCB), Tick Cell Biobank (TCB), Tohoku University cell line catalog (TKG), and Ximbio.
Discontinued
https://web.expasy.org/cellosaurus/CVCL_2930
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_2930) Copy
Discontinued
https://web.expasy.org/cellosaurus/CVCL_2928
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_2928) Copy
Discontinued
https://web.expasy.org/cellosaurus/CVCL_0294
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: Deep exome analysis., Omics: Array-based CGH., Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_0294) Copy
Discontinued
https://web.expasy.org/cellosaurus/CVCL_2931
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_2931) Copy
Discontinued
https://web.expasy.org/cellosaurus/CVCL_2929
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_2929) Copy
https://web.expasy.org/cellosaurus/CVCL_1233
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: DNA methylation analysis., Omics: Deep exome analysis., Population: Caucasian., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_1233) Copy
https://web.expasy.org/cellosaurus/CVCL_1818
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Virome analysis using RNAseq., Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Omics: Array-based CGH., Population: Caucasian., Part of: MD Anderson Cell Lines Project., Part of: LL-100 blood cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_1818) Copy
Contaminated
https://web.expasy.org/cellosaurus/CVCL_2050
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Deep exome analysis., Population: Caucasian., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Contaminated. Shown to be a U-343MGa derivative (PubMed=22570425). Originally thought to originate from the brain of a 55 year old patient with a mixed astro-oligodendroglioma (grade II/III)..
Proper citation: (RRID:CVCL_2050) Copy
https://web.expasy.org/cellosaurus/CVCL_8876
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Deep exome analysis., Population: Japanese., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_8876) Copy
https://web.expasy.org/cellosaurus/CVCL_1239
Organism:
Disease:
Category: Cancer cell line
Comments: Miscellaneous: Originally classified as originating from a neuroglioma, an obsolete classification. This cell line has been reclassified as an astrocytoma., Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Caucasian., Part of: TCGA-110-CL cell line panel., Part of: PTEN genetic alteration cell panel (ATCC TCP-1030)., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_1239) Copy
https://web.expasy.org/cellosaurus/CVCL_2914
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Omics: CRISPR phenotypic screen., Characteristics: Produces high level of parathyroid hormone-related peptide (PTHrP)., Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_2914) Copy
https://web.expasy.org/cellosaurus/CVCL_0018
Organism:
Disease:
Category: Cancer cell line
Comments: Miscellaneous: The values for the STR markers F13A01, F13B, FESFPS and LPL used to be shown on the ATCC website but are no longer displayed (see Internet archive link for archival version)., Omics: Transcriptome analysis by serial analysis of gene expression (SAGE)., Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Deep exome analysis., Population: Caucasian., Part of: ENCODE project common cell types; tier 3., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (CLS Cat# 305136, RRID:CVCL_0018) Copy
https://web.expasy.org/cellosaurus/CVCL_1155
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by serial analysis of gene expression (SAGE)., Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Proteome analysis by 2D-DE/MS., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Caucasian., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (CLS Cat# 300330, RRID:CVCL_1155) Copy
https://web.expasy.org/cellosaurus/CVCL_1098
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Virology: Susceptible to infection by Zika virus (ZIKV) (PubMed=29468137)., Population: Caucasian., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Group: Patented cell line.
Proper citation: (RRID:CVCL_1098) Copy
Misclassified Misclassified Discontinued Discontinued
https://web.expasy.org/cellosaurus/CVCL_0027
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Virome analysis using proteomics., Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Secretome proteome analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: miRNA expression profiling., Omics: Metabolome analysis., Omics: Genome sequenced., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep proteome analysis., Omics: Deep phosphoproteome analysis., Omics: Deep exome analysis., Omics: Deep antibody staining analysis., Omics: H4K20me1 ChIP-seq epigenome analysis., Omics: H3K9me3 ChIP-seq epigenome analysis., Omics: H3K9ac ChIP-seq epigenome analysis., Omics: H3K79me2 ChIP-seq epigenome analysis., Omics: H3K4me3 ChIP-seq epigenome analysis., Omics: H3K4me2 ChIP-seq epigenome analysis., Omics: H3K4me1 ChIP-seq epigenome analysis., Omics: H3K36me3 ChIP-seq epigenome analysis., Omics: H3K27me3 ChIP-seq epigenome analysis., Omics: H3K27ac ChIP-seq epigenome analysis., Omics: CTCF ChIP-seq epigenome analysis., Population: Caucasian., Part of: TCGA-110-CL cell line panel., Part of: MD Anderson Cell Lines Project., Part of: Liver Cancer Model Repository (LIMORE)., Part of: JFCR45 cancer cell line panel., Part of: ENCODE project common cell types; tier 1., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Misclassified. Originally thought to be a hepatocellular carcinoma cell line but shown to be from an hepatoblastoma (PubMed=19751877).., Group: Patented cell line.
Proper citation: (RRID:CVCL_0027) Copy
https://web.expasy.org/cellosaurus/CVCL_8878
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: Protein expression by reverse-phase protein arrays., Omics: SNP array analysis., Omics: shRNA library screening., Omics: Deep quantitative proteome analysis., Omics: Deep proteome analysis., Omics: Deep exome analysis., Population: Caucasian., Part of: MD Anderson Cell Lines Project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_8878) Copy
https://web.expasy.org/cellosaurus/CVCL_1281
Organism:
Disease:
Category: Cancer cell line
Comments: Caution: TP53 mutation indicated incorrectly as being at c.747G>T in PubMed=8389256., Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Protein expression by reverse-phase protein arrays., Omics: miRNA expression profiling., Omics: Genome sequenced., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Liver Cancer Model Repository (LIMORE)., Part of: JFCR45 cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_1281) Copy
Possibly Discontinued
https://web.expasy.org/cellosaurus/CVCL_2255
Organism:
Disease:
Category: Undefined cell line type
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Deep exome analysis., Population: African American., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Misclassified. Originally thought to be a lung squamous cell carcinoma cell line but using a variety of omics methods was shown to be a a fibroblastic cell line (DOI=10.1101/166199; DepMap=ACH-000797)..
Proper citation: (ATCC Cat# CCL-199, RRID:CVCL_2255) Copy
Possibly Discontinued
https://web.expasy.org/cellosaurus/CVCL_2255
Organism:
Disease:
Category: Undefined cell line type
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: Deep exome analysis., Population: African American., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Misclassified. Originally thought to be a lung squamous cell carcinoma cell line but using a variety of omics methods was shown to be a a fibroblastic cell line (DOI=10.1101/166199; DepMap=ACH-000797)..
Proper citation: (RRID:CVCL_2255) Copy
https://web.expasy.org/cellosaurus/CVCL_1283
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by RNAseq., Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: DNA methylation analysis., Omics: Deep exome analysis., Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: (RRID:CVCL_1283) Copy
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