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Cellosaurus is database indexing available cell lines from various collections: American Type Culture Collection (ATCC), Bioresource Collection and Research Center, Taiwan (BCRC), Banco de Células do Rio de Janeiro (BCRJ), CellBank Australia (CBA), Collection of Cell Lines in Veterinary Medicine (CCLV), Cell Lines Service (CLS), Coriell, Drosophila Genomics Resource Center (DGRC), Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSMZ), European Bank for induced pluripotent Stem Cells (EBiSC), European Collection of Authenticated Cell Cultures (ECACC), Interlab Cell Line Collection (ICLC), Institute for Fermentation Osaka (IFO), Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) biobank, Japanese Collection of Research Bioresources (JCRB) Cell Bank, Kunming Cell Bank of Type Culture Collection (KCB), Korean Cell Line Bank (KCLB), Millipore, National Cell Bank of Iran (NCBI_Iran), National Cancer Institute - Developmental Therapeutics Program (NCI-DTP), NINDS Human Cell and Data Repository (NHCDR), NIH AIDS Reagent Program (NIH-ARP), NISES, RIKEN Bioresource Center Cell Bank (RCB), Royan Stem Cell Bank (RSCB), Tick Cell Biobank (TCB), Tohoku University cell line catalog (TKG), and Ximbio.
Contaminated
https://web.expasy.org/cellosaurus/CVCL_2094
Organism: Homo sapiens (Human)
Disease: Invasive breast carcinoma of no special type
Category: Cancer cell line
Comments: Population: Caucasian., Part of: JFCR45 cancer cell line panel., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Contaminated. Shown to be a MCF-7 derivative (PubMed=18304946; PubMed=20143388)..
Proper citation: RRID:CVCL_2094 Copy
https://web.expasy.org/cellosaurus/CVCL_0379
Organism: Homo sapiens (Human)
Disease: Chronic myelogenous leukemia, BCR-ABL1 positive
Category: Cancer cell line
Comments: Population: Japanese., Part of: LL-100 blood cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_0379 Copy
https://web.expasy.org/cellosaurus/CVCL_1344
Organism: Homo sapiens (Human)
Disease: Bladder carcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1344 Copy
https://web.expasy.org/cellosaurus/CVCL_1345
Organism: Homo sapiens (Human)
Disease: High grade ovarian serous adenocarcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: TCGA-110-CL cell line panel., Part of: MD Anderson Cell Lines Project., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1345 Copy
https://web.expasy.org/cellosaurus/CVCL_1353
Organism: Homo sapiens (Human)
Disease: Esophageal squamous cell carcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1353 Copy
https://web.expasy.org/cellosaurus/CVCL_1354
Organism: Homo sapiens (Human)
Disease: Esophageal squamous cell carcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1354 Copy
https://web.expasy.org/cellosaurus/CVCL_1355
Organism: Homo sapiens (Human)
Disease: Esophageal squamous cell carcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1355 Copy
Possibly Misclassified
https://web.expasy.org/cellosaurus/CVCL_3007
Organism: Homo sapiens (Human)
Disease: Embryonal rhabdomyosarcoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Possibly misclassified. It is not certain that this cell line originate from a alveolar rhabdomyosarcoma (ARMS). It lacks the PAXA3-FOXO1 gene fusion characteristics of ARMS. Many papers classify it as an embryonal rhabdomyosarcoma (ERMS) and we accordingly describe it as such..
Proper citation: RRID:CVCL_3007 Copy
https://web.expasy.org/cellosaurus/CVCL_1362
Organism: Homo sapiens (Human)
Disease: Hodgkin lymphoma
Category: Cancer cell line
Comments: Population: Caucasian., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: DSMZ Cat# ACC-72, RRID:CVCL_1362 Copy
https://web.expasy.org/cellosaurus/CVCL_1362
Organism: Homo sapiens (Human)
Disease: Hodgkin lymphoma
Category: Cancer cell line
Comments: Population: Caucasian., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1362 Copy
https://web.expasy.org/cellosaurus/CVCL_2096
Organism: Homo sapiens (Human)
Disease: Hodgkin lymphoma
Category: Cancer cell line
Comments: Population: Caucasian., Part of: LL-100 blood cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_2096 Copy
https://web.expasy.org/cellosaurus/CVCL_0388
Organism: Homo sapiens (Human)
Disease: Chronic myelogenous leukemia, BCR-ABL1 positive
Category: Cancer cell line
Comments: Part of: LL-100 blood cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_0388 Copy
https://web.expasy.org/cellosaurus/CVCL_0359
Organism: Homo sapiens (Human)
Disease: Bladder carcinoma
Category: Cancer cell line
Comments: Population: Caucasian; Swedish., Part of: UBC-40 urothelial bladder cancer cell line index., Part of: PTEN genetic alteration cell panel (ATCC TCP-1030)., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Part of: BLA-40 bladder carcinoma cell line panel.
Proper citation: RRID:CVCL_0359 Copy
https://web.expasy.org/cellosaurus/CVCL_1865
Organism: Homo sapiens (Human)
Disease: Mantle cell lymphoma
Category: Cancer cell line
Comments: Population: Korean., Part of: MD Anderson Cell Lines Project., Part of: Lymphoma Research Foundation Mantle Cell Lymphoma cell bank (LRF MCL cell bank)., Part of: LL-100 blood cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_1865 Copy
Discontinued
https://web.expasy.org/cellosaurus/CVCL_2787
Organism: Homo sapiens (Human)
Disease: Hepatitis C infection
Category: Cancer cell line
Comments: Caution: FLC-4 (Cellosaurus=CVCL_D204) is often stated to be synonymous with JHH-4, but a FLC-4 patent reference (Patent=US5804441) seems to indicate that it is derived from JHH-4 and has a different karyotype., Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Liver Cancer Model Repository (LIMORE)., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_2787 Copy
https://web.expasy.org/cellosaurus/CVCL_4649
Organism: Homo sapiens (Human)
Disease: High grade ovarian serous adenocarcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: TCGA-110-CL cell line panel., Part of: MD Anderson Cell Lines Project., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_4649 Copy
https://web.expasy.org/cellosaurus/CVCL_4645
Organism: Homo sapiens (Human)
Disease: Ovarian mucinous adenocarcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_4645 Copy
Partially Contaminated Discontinued Discontinued
https://web.expasy.org/cellosaurus/CVCL_2785
Organism: Homo sapiens (Human)
Disease: Hepatitis C infection
Category: Cancer cell line
Comments: Population: Japanese., Part of: Liver Cancer Model Repository (LIMORE)., Part of: JFCR45 cancer cell line panel., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Partially contaminated. Some JCRB stocks were found to be from mouse (PubMed=20143388). Stock bought in 2013 was shown to be human by exome sequencing (personal communication of Rebouissou, Sandra)..
Proper citation: JCRB Cat# NIHS0056, RRID:CVCL_2785 Copy
Discontinued
https://web.expasy.org/cellosaurus/CVCL_2786
Organism: Homo sapiens (Human)
Disease: Adult hepatocellular carcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Liver Cancer Model Repository (LIMORE)., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_2786 Copy
https://web.expasy.org/cellosaurus/CVCL_4644
Organism: Homo sapiens (Human)
Disease: Ovarian mucinous adenocarcinoma
Category: Cancer cell line
Comments: Population: Japanese., Part of: MD Anderson Cell Lines Project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Proper citation: RRID:CVCL_4644 Copy
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