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Cellosaurus is database indexing available cell lines from various collections: American Type Culture Collection (ATCC), Bioresource Collection and Research Center, Taiwan (BCRC), Banco de Células do Rio de Janeiro (BCRJ), CellBank Australia (CBA), Collection of Cell Lines in Veterinary Medicine (CCLV), Cell Lines Service (CLS), Coriell, Drosophila Genomics Resource Center (DGRC), Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSMZ), European Bank for induced pluripotent Stem Cells (EBiSC), European Collection of Authenticated Cell Cultures (ECACC), Interlab Cell Line Collection (ICLC), Institute for Fermentation Osaka (IFO), Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) biobank, Japanese Collection of Research Bioresources (JCRB) Cell Bank, Kunming Cell Bank of Type Culture Collection (KCB), Korean Cell Line Bank (KCLB), Millipore, National Cell Bank of Iran (NCBI_Iran), National Cancer Institute - Developmental Therapeutics Program (NCI-DTP), NINDS Human Cell and Data Repository (NHCDR), NIH AIDS Reagent Program (NIH-ARP), NISES, RIKEN Bioresource Center Cell Bank (RCB), Royan Stem Cell Bank (RSCB), Tick Cell Biobank (TCB), Tohoku University cell line catalog (TKG), and Ximbio.
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_M596
Organism:
Disease:
Category: Cancer cell line
Comments: Characteristics: Partial revertant of the CPT30 camptothecin-resistant subline., Problematic cell line: Parent cell line (HONE-1) seems to bear part of the HeLa genomic sequence and may be a derivative of HeLa and another cell of unknown origin..
Proper citation: (RRID:CVCL_M596) Copy
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_A424
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: SNP array analysis., From: Scott and White Clinic; Temple; USA., Part of: UBC-40 urothelial bladder cancer cell line index., Problematic cell line: Possibly misidentified/contaminated. Reported by PubMed=11787853 to contain the same HPV18 sequences as the cervix carcinoma cell line C-4-I (Cellosaurus=CVCL_2253) and to lack mutations in KRAS, TP53, CDKN2A and DPC4 often found in pancreatic adenocarcinoma. Considered by PubMed=25997541 to be a bladder carcinoma cell line..
Proper citation: (RRID:CVCL_A424) Copy
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_4057
Organism:
Disease:
Category: Cancer cell line
Comments: From: Scott and White Clinic; Temple; USA., Problematic cell line: Possibly misidentified/contaminated. Reported by PubMed=11787853 to contain the same HPV18 sequences as the cervix carcinoma cell line C-4-I (Cellosaurus=CVCL_2253) and to lack mutations in KRAS, TP53, CDKN2 and DPC4 often found in pancreatic adenocarcinoma..
Proper citation: (RRID:CVCL_4057) Copy
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_V613
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: shRNA library screening., Omics: Deep exome analysis., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Probably misidentified/contaminated. Except of a loss of an allele of TH01 the STR profile of SF172 is identical to that of SF763. Furthermore we could not find in the literature any trace of the exact origin of SF172 and, according to a personal communication of Shai A. from the UCSF Biorepository, there is no record of SF172 in their system while SF763 is registered there. The TP53 mutation recorded for SF763 is also identical to the one in SF172..
Proper citation: (RRID:CVCL_V613) Copy
Possibly Misidentified/Contaminated Discontinued
https://web.expasy.org/cellosaurus/CVCL_1676
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Possibly misidentified/contaminated. Shown to be identical to SBC-2 (JCRB web site and STR profile)..
Proper citation: (RRID:CVCL_1676) Copy
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_0319
Organism:
Disease:
Category: Factor-dependent cell line
Comments: Characteristics: IL2 and IL4 dependent., Problematic cell line: Probably misidentified/contaminated. While said to originate from a BALB/c mouse it exhibits a greater similarity with a C57BL strain. Its STR profile has three alleles or more at seven loci, high peak height imbalance and is discordant at eight STR markers. It therefore needs more characterization to determine if it is contaminated or misidentified due to the inconsistencies with the strain of origin and the increase of alleles per marker (PubMed=31220119)..
Proper citation: (RRID:CVCL_0319) Copy
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_M595
Organism:
Disease:
Category: Cancer cell line
Comments: Problematic cell line: Parent cell line (HONE-1) seems to bear part of the HeLa genomic sequence and may be a derivative of HeLa and another cell of unknown origin..
Proper citation: (RRID:CVCL_M595) Copy
Possibly Misidentified/Contaminated
https://web.expasy.org/cellosaurus/CVCL_W531
Organism:
Disease:
Category: Cancer cell line
Comments: Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Population: Japanese., Problematic cell line: Possibly misidentified/contaminated. Shown to be identical to SBC-1 (JCRB web site and STR profile)..
Proper citation: (RRID:CVCL_W531) Copy
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