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Cellosaurus is database indexing available cell lines from various collections: American Type Culture Collection (ATCC), Bioresource Collection and Research Center, Taiwan (BCRC), Banco de Células do Rio de Janeiro (BCRJ), CellBank Australia (CBA), Collection of Cell Lines in Veterinary Medicine (CCLV), Cell Lines Service (CLS), Coriell, Drosophila Genomics Resource Center (DGRC), Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSMZ), European Bank for induced pluripotent Stem Cells (EBiSC), European Collection of Authenticated Cell Cultures (ECACC), Interlab Cell Line Collection (ICLC), Institute for Fermentation Osaka (IFO), Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) biobank, Japanese Collection of Research Bioresources (JCRB) Cell Bank, Kunming Cell Bank of Type Culture Collection (KCB), Korean Cell Line Bank (KCLB), Millipore, National Cell Bank of Iran (NCBI_Iran), National Cancer Institute - Developmental Therapeutics Program (NCI-DTP), NINDS Human Cell and Data Repository (NHCDR), NIH AIDS Reagent Program (NIH-ARP), NISES, RIKEN Bioresource Center Cell Bank (RCB), Royan Stem Cell Bank (RSCB), Tick Cell Biobank (TCB), Tohoku University cell line catalog (TKG), and Ximbio.
| Name | Proper Citation | Organism | Disease |
Comments |
Defining Citation | Category | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
HONE-1/CPT30R Resource Report Resource Website Possibly Misidentified/Contaminated |
(RRID:CVCL_M596) | Characteristics: Partial revertant of the CPT30 camptothecin-resistant subline., Problematic cell line: Parent cell line (HONE-1) seems to bear part of the HeLa genomic sequence and may be a derivative of HeLa and another cell of unknown origin.. | PMID:12097280 | Cancer cell line | Male | CPT30R | cancercelllines:CVCL_M596, Wikidata:Q54890149 |
CVCL_M596 | 2025-01-31 12:19:16 | 0 | ||||||
|
SW850 Resource Report Resource Website Possibly Misidentified/Contaminated |
(RRID:CVCL_A424) | Omics: SNP array analysis., From: Scott and White Clinic; Temple; USA., Part of: UBC-40 urothelial bladder cancer cell line index., Problematic cell line: Possibly misidentified/contaminated. Reported by PubMed=11787853 to contain the same HPV18 sequences as the cervix carcinoma cell line C-4-I (Cellosaurus=CVCL_2253) and to lack mutations in KRAS, TP53, CDKN2A and DPC4 often found in pancreatic adenocarcinoma. Considered by PubMed=25997541 to be a bladder carcinoma cell line.. |
PMID:327080 PMID:833871 PMID:1906154 PMID:6220172 PMID:8426738 PMID:9472115 PMID:11787853 PMID:25997541 PMID:26621286 |
Cancer cell line | Male | SW-850, SW 850 | Cosmic:736278, Cosmic:933518, GEO:GSM1567856, Wikidata:Q54971214 |
CVCL_A424 | 2025-01-31 12:47:15 | 0 | ||||||
|
SW979 Resource Report Resource Website Possibly Misidentified/Contaminated |
(RRID:CVCL_4057) | From: Scott and White Clinic; Temple; USA., Problematic cell line: Possibly misidentified/contaminated. Reported by PubMed=11787853 to contain the same HPV18 sequences as the cervix carcinoma cell line C-4-I (Cellosaurus=CVCL_2253) and to lack mutations in KRAS, TP53, CDKN2 and DPC4 often found in pancreatic adenocarcinoma.. |
PMID:833871 PMID:3518877 PMID:6935474 PMID:8026879 PMID:8426738 PMID:11169959 PMID:11787853 PMID:12800145 |
Cancer cell line | Male | SW-979, SW 979 | Cosmic:736279, Cosmic:922261, Cosmic:933520, Wikidata:Q54971228 |
CVCL_4057 | 2025-01-31 12:47:15 | 0 | ||||||
|
SF172 Resource Report Resource Website Possibly Misidentified/Contaminated |
(RRID:CVCL_V613) | Omics: shRNA library screening., Omics: Deep exome analysis., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Probably misidentified/contaminated. Except of a loss of an allele of TH01 the STR profile of SF172 is identical to that of SF763. Furthermore we could not find in the literature any trace of the exact origin of SF172 and, according to a personal communication of Shai A. from the UCSF Biorepository, there is no record of SF172 in their system while SF763 is registered there. The TP53 mutation recorded for SF763 is also identical to the one in SF172.. |
PMID:25984343 PMID:30894373 PMID:31068700 |
Cancer cell line | Female | SF-172 | BioSample:SAMN10988399, cancercelllines:CVCL_V613, Cell_Model_Passport:SIDM01351, Cosmic:2516034, DepMap:ACH-000887, PharmacoDB:SF172_1365_2019, Progenetix:CVCL_V613, Wikidata:Q54952895 |
CVCL_V613 | 2025-01-31 12:45:30 | 0 | ||||||
|
SBC-1 Resource Report Resource Website 1+ mentions Possibly Misidentified/Contaminated Discontinued |
(RRID:CVCL_1676) | Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Omics: DNA methylation analysis., Omics: Deep quantitative proteome analysis., Omics: Deep exome analysis., Population: Japanese., Part of: COSMIC cell lines project., Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE)., Problematic cell line: Possibly misidentified/contaminated. Shown to be identical to SBC-2 (JCRB web site and STR profile).. |
PMID:2540905 PMID:8286010 PMID:9290701 PMID:9413215 PMID:12569360 PMID:17270020 PMID:18937546 PMID:20164919 PMID:22399608 PMID:25120651 PMID:27397505 PMID:30894373 PMID:35839778 |
Cancer cell line | Male | SBC1, Lc817, LC817 | BTO:BTO_0005442, CLO:CLO_0037041, ArrayExpress:E-MTAB-783, ArrayExpress:E-MTAB-3610, BioSample:SAMN03472514, cancercelllines:CVCL_1676, Cell_Model_Passport:SIDM00365, ChEMBL-Cells:CHEMBL3308214, ChEMBL-Targets:CHEMBL2366327, Cosmic:713885, Cosmic:1995623, Cosmic-CLP:713885, DepMap:ACH-002196, EGA:EGAS00001000978, GDSC:713885, GEO:GSM986190, GEO:GSM1670404, IARC_TP53:27235, JCRB:JCRB0816, JCRB:NIHS0676, LINCS_LDP:LCL-1865, PharmacoDB:SBC1_1347_2019, PRIDE:PXD030304, Progenetix:CVCL_1676, PubChem_Cell_line:CVCL_1676, Wikidata:Q54902178 |
CVCL_1676 | 2025-01-31 12:44:26 | 1 | ||||||
|
HT-2 clone A5E Resource Report Resource Website Possibly Misidentified/Contaminated |
(RRID:CVCL_0319) | Characteristics: IL2 and IL4 dependent., Problematic cell line: Probably misidentified/contaminated. While said to originate from a BALB/c mouse it exhibits a greater similarity with a C57BL strain. Its STR profile has three alleles or more at seven loci, high peak height imbalance and is discordant at eight STR markers. It therefore needs more characterization to determine if it is contaminated or misidentified due to the inconsistencies with the strain of origin and the increase of alleles per marker (PubMed=31220119).. | PMID:31220119 | Factor-dependent cell line | HT2-clone-A5E, HT2 Clone A5E | CLO:CLO_0004281, CLO:CLO_0004282, MCCL:MCC:0000212, CLDB:cl1745, ATCC:CRL-1841, ECACC:92021401, Wikidata:Q54896508 |
CVCL_0319 | 2025-01-31 12:24:10 | 0 | |||||||
|
SBC-2 [Human SCLC] Resource Report Resource Website Possibly Misidentified/Contaminated |
(RRID:CVCL_W531) | Omics: Transcriptome analysis by microarray., Omics: SNP array analysis., Population: Japanese., Problematic cell line: Possibly misidentified/contaminated. Shown to be identical to SBC-1 (JCRB web site and STR profile).. |
PMID:8286010 PMID:9290701 PMID:9413215 PMID:10358721 PMID:10628341 PMID:15016488 PMID:20215515 PMID:22399608 |
Cancer cell line | Male | CLO:CLO_0008951, cancercelllines:CVCL_W531, Cell_Model_Passport:SIDM00366, GEO:GSM17312, GEO:GSM827568, JCRB:JCRB0817, LINCS_LDP:LCL-1866, Progenetix:CVCL_W531, Wikidata:Q54952165 |
CVCL_W531 | 2025-01-31 12:44:26 | 0 | |||||||
|
HONE-1/CPT30 Resource Report Resource Website Possibly Misidentified/Contaminated |
(RRID:CVCL_M595) | Problematic cell line: Parent cell line (HONE-1) seems to bear part of the HeLa genomic sequence and may be a derivative of HeLa and another cell of unknown origin.. | PMID:12097280 | Cancer cell line | Male | CPT30 | cancercelllines:CVCL_M595, ChEMBL-Cells:CHEMBL3307934, ChEMBL-Targets:CHEMBL614470, PubChem_Cell_line:CVCL_M595, Wikidata:Q54890148 |
CVCL_M595 | 2025-01-31 12:19:16 | 0 |
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