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Plasmids are provided by Addgene and DGRC.

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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Authority Record Last Update Mentions Count
YCe1693 HC_Kan_RFP-p1
 
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RRID:Addgene_100609 Kanamycin PMID:28418644 It is used to standardize new parts for EMMA toolkit. New DNA fragments (parts) are cloned into this plasmid replacing the RFP gene through a BsaI Golden Gate reaction. The resulting plasmid will have the part flanked by BsmBI sites and the fusion sites corresponding to position 1 of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin Addgene 2026-09-26 02:18:18 0
pDONOR-tagBFP-PSM-EGFP
 
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1+ mentions
RRID:Addgene_100603 Ampicillin PMID:28988985 Backbone Size:2898; Vector Backbone:pUC-AMPr based; Vector Types:Synthetic Biology; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 8
pFloxed DHFR-TS*
 
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RRID:Addgene_100605 Floxed TgDHFR-TS* Toxoplasma gondii Ampicillin Backbone Size:2678; Vector Backbone:pUC19; Vector Types:Toxoplasma expression; Bacterial Resistance:Ampicillin Pyrimethamine resistance Addgene 2026-09-26 02:18:18 0
hgRNA-G21_pLKO-Hyg
 
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RRID:Addgene_100565 hgRNA-G21 Ampicillin PMID:27918539 Vector Backbone:pLKO.1 Hygro; Vector Types:Mammalian Expression, Lentiviral, CRISPR, Synthetic Biology; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 0
pDONR207-MpPHOT
 
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RRID:Addgene_100600 MpPHOT Marchantia polymorpha Gentamicin PMID:27027881 Vector Backbone:pDONR207; Vector Types:Gateway Cloning; Bacterial Resistance:Gentamicin Addgene 2026-09-26 02:18:18 0
pMpGWB106-OEP7(1–50)
 
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RRID:Addgene_100602 OEP7(1–50)-Citrine Arabidopsis thaliana Spectinomycin PMID:28634853 Vector Backbone:pMpGWB106; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin Addgene 2026-09-26 02:18:18 0
hgRNA-A76_pLKO-Hyg
 
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RRID:Addgene_100568 hgRNA-A76 Ampicillin PMID:27918539 Vector Backbone:pLKO.1 Hygro; Vector Types:Mammalian Expression, Lentiviral, CRISPR, Synthetic Biology; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 0
YCe1717 HC_Kan_RFP-p8b
 
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RRID:Addgene_100618 Kanamycin PMID:28418644 It is used to standardize new parts for EMMA toolkit. New DNA fragments (parts) are cloned into this plasmid replacing the RFP gene through a BsaI Golden Gate reaction. The resulting plasmid will have the part flanked by BsmBI sites and the fusion sites corresponding to position 8b of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin Addgene 2026-09-26 02:18:18 0
FISSEQ-hgRNA-Design1
 
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RRID:Addgene_100571 FISSEQ-hgRNA-Design1 Ampicillin PMID:27918539 Vector Backbone:pLKO.1 Hygro; Vector Types:Mammalian Expression, Lentiviral, CRISPR, Synthetic Biology; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 0
YCe1502 HC_Kan_RFP-p3
 
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RRID:Addgene_100611 Kanamycin PMID:28418644 It is used to standardize new parts for EMMA toolkit. New DNA fragments (parts) are cloned into this plasmid replacing the RFP gene through a BsaI Golden Gate reaction. The resulting plasmid will have the part flanked by BsmBI sites and the fusion sites corresponding to position 3 of EMMA platform. Vector Backbone:pSMART HC_Kan; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin Addgene 2026-09-26 02:18:18 0
pTKEI-tLOV
 
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RRID:Addgene_100574 tLOV Synthetic Kanamycin PMID:28707884 Backbone Size:3712; Vector Backbone:pTKEI-Dest; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin Addgene 2026-09-26 02:18:18 0
pSLQ1651-sgRNA(F+E)-sgGal4
 
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1+ mentions
RRID:Addgene_100549 sgGal4 E. coli Ampicillin PMID:28841410 Backbone Marker:Addgene #51024; Vector Backbone:pSLQ1651-sgRNA(F+E); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 8
pEF1a-FB-dCas9-puro
 
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10+ mentions
RRID:Addgene_100547 N-terminal Flag and biotin-acceptor-site (FB)-tagged dCas9 Streptococcus pyogenes Ampicillin PMID:28841410 Backbone Size:7064; Vector Backbone:pEF1a-FB-puro; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 18
pcDNA3.1-TYMS
 
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1+ mentions
RRID:Addgene_100545 thymidylate synthetase Homo sapiens Ampicillin PMID:29100421 Backbone Marker:invitrogen; Backbone Size:5428; Vector Backbone:pCDNA3.1+; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 2
pcDNA3.1-TK1
 
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1+ mentions
RRID:Addgene_100544 thymidine kinase 1 Homo sapiens Ampicillin PMID:29100421 Backbone Marker:invitrogen; Backbone Size:5428; Vector Backbone:pCDNA3.1+; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 6
AAVS1_sgRNA
 
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1+ mentions
RRID:Addgene_100554 AAVS1 sgRNA Kanamycin PMID:28737741 Vector Backbone:gRNA_cloning_vector (#41824); Vector Types:; Bacterial Resistance:Kanamycin Addgene 2026-09-26 02:18:18 4
ciCas9(F22)_pcDNA5
 
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RRID:Addgene_100552 ciCas9(F22) Ampicillin PMID:28737741 Backbone Marker:Life Technology; Vector Backbone:pcDNA5/FRT/TO; Vector Types:Mammalian Expression, CRISPR, FRT, Flp-In; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 0
ciCas9(L22)_pcDNA5
 
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1+ mentions
RRID:Addgene_100551 ciCas9(L22) Ampicillin PMID:28737741 Backbone Marker:Life Technology; Vector Backbone:pcDNA5/FRT/TO; Vector Types:Mammalian Expression, CRISPR, FRT, Flp-In; Bacterial Resistance:Ampicillin Addgene 2026-09-26 02:18:18 1
EMX1*_sgRNA
 
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RRID:Addgene_100558 EMX1 sgRNA Kanamycin PMID:28737741 Vector Backbone:gRNA_cloning_vector (#41824); Vector Types:; Bacterial Resistance:Kanamycin Addgene 2026-09-26 02:18:18 0
MYC sgRNA5
 
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RRID:Addgene_100557 MYC sgRNA5 Kanamycin PMID:28737741 Vector Backbone:gRNA_cloning_vector (#41824); Vector Types:; Bacterial Resistance:Kanamycin Addgene 2026-09-26 02:18:18 0

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