Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Species: Danio rerio
Genetic Insert: mogat2
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:3900; Vector Backbone:pCRII-TOPO; Vector Types:in vitro transcription; Bacterial Resistance:Ampicillin and Kanamycin
Defining Citation: PMID:39510175
Proper citation: RRID:Addgene_232139 Copy
Species: Danio rerio
Genetic Insert: dgat1b
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:3900; Vector Backbone:pCRII-TOPO; Vector Types:in vitro transcription; Bacterial Resistance:Ampicillin and Kanamycin
Defining Citation: PMID:39510175
Proper citation: RRID:Addgene_232138 Copy
Species: Danio rerio
Genetic Insert: eef1a1l1
Vector Backbone Description: Backbone Marker:Sean Megason; Backbone Size:4314; Vector Backbone:pMTB Addgene #112225; Vector Types:; Bacterial Resistance:Ampicillin
Proper citation: RRID:Addgene_254856 Copy
Species: Danio rerio
Genetic Insert: ubiquitin promoter
Vector Backbone Description: Backbone Marker:Unknown; Backbone Size:6500; Vector Backbone:pTol2Dest-pGH_R4-R3; Vector Types:Cre/Lox, Zebrafish expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:42403048
Comments: The discrepancies between the depositor's sequence and Addgene's sequences have no functional consequences.
Proper citation: RRID:Addgene_226786 Copy
Species: Danio rerio
Genetic Insert: ziwi promoter
Vector Backbone Description: Backbone Marker:Unknown; Backbone Size:9708; Vector Backbone:pTol2Dest-pGH_R4-R3; Vector Types:Cre/Lox, Zebrafish expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:42403048
Comments: The discrepancies between the depositor's sequence and Addgene's sequences have no functional consequences.
Proper citation: RRID:Addgene_226785 Copy
Species: Danio rerio
Genetic Insert: ziwi promoter
Vector Backbone Description: Backbone Size:6946; Vector Backbone:pTol2Dest-pBH_R4-R2; Vector Types:Cre/Lox, Zebrafish expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:42403048
Comments: The discrepancies between the depositor's sequence and Addgene's sequences have no functional consequences.
Proper citation: RRID:Addgene_226788 Copy
Species: Danio rerio
Genetic Insert: askopos promoter
Vector Backbone Description: Backbone Marker:Tol2kit v1.0; Backbone Size:2643; Vector Backbone:p5E-MCS; Vector Types:Gateway 5'-entry vector; Bacterial Resistance:Kanamycin
Defining Citation: PMID:42403048
Comments: The discrepancies between the depositor's sequence and Addgene's sequences have no functional consequences.
Proper citation: RRID:Addgene_226791 Copy
Species: Danio rerio
Genetic Insert: Ace2N-mNeon
Vector Backbone Description: Vector Backbone:pDestTol pA2; Vector Types:Zebrafish expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:42109300
Comments: Please visit https://doi.org/10.1101/2024.12.12.628143 for bioRxiv preprint.
Proper citation: RRID:Addgene_253619 Copy
Species: Danio rerio
Genetic Insert: nanos2
Vector Backbone Description: Backbone Marker:Nathan Lawson; Backbone Size:2810; Vector Backbone:p5E-MCS; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Comments: Cloned by Maya Pahima.
The putative zebrafish nos2 promoter was cloned from zebrafish ovary gDNA from a region directly upstream of the nos2 coding sequence with the following primers: 3’-ACTGGCCTAAAGGGTGTCCT-5’ and 3’-CGTCCCTTGCCTTTAGTCTG-5’. The cloned amplicon was inserted into the pCR8 cloning vector using the TOPO™ TA Cloning Kit (Thermo Fisher, K250020) for stabilization and sequencing. Putative nos2 promoter region was excised from the TOPO vector using EcoRI and SmaI, treated with T4 polymerase, then inserted into SmaI-linearized p5E-MCS (Addgene, #26029).
Proper citation: RRID:Addgene_226796 Copy
Species: Danio rerio
Genetic Insert: nanos2
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:2640; Vector Backbone:pDONR-P2R-P3; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Comments: Cloned by Maya Pahima.
The putative zebrafish nos2 3'utr was cloned from zebrafish ovary gDNA using primers (3’-ATCAACCAATGCTGAATCTTTTTATAAAAAATTGAA-5' and 3’-AAATAAAATATATCAGGAGGAAACAAATATATCAGG-5') and inserted into the pCR4 cloning vector using the TOPO™ TA Cloning Kit (Thermo Fisher, K457502) for stabilization and sequencing (pCR4-nos2,3'utr). To insert the nos2,3’utr sequence into a Gateway Cloning vector, the region was amplified with attB primers (3'-GGGGACAGCTTTCTTGTACAAAGTGGTATATCAACCAATGCTGAATCTTTTTATAAAAAATTGAA-5' and 3'-GGGGACAACTTTGTATAATAAAGTTGTAAATAAAATATATCAGGAGGAAACAAATATATCAGG-5') and a BP reaction was performed with the Gateway BP Clonase II Enzyme mix (Invitrogen, 11789020) to recombine the amplicon into pDONR-P2R-P3 (Invitrogen, 12537-023) and produce p3E-nos2,3’utr.
Proper citation: RRID:Addgene_226799 Copy
Species: Danio rerio
Genetic Insert: zSynA
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:3961; Vector Backbone:PCRII-TOPO; Vector Types:in-situ; Bacterial Resistance:Ampicillin
Comments: zSynA in situ probe.
For antisense, cut with BamHI and transcribe with T7
Proper citation: RRID:Addgene_20121 Copy
Species: Danio rerio
Genetic Insert: birA tagRFP
Vector Backbone Description: Backbone Marker:Kawakami; Backbone Size:6173; Vector Backbone:pT2KXIGdeltaIn; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:25231762
Comments: Note: Addgene's quality control sequencing has found some discrepancies with the depositor's uploaded sequence. The depositing lab is aware of these differences, and they are not thought to affect plasmid function.
Proper citation: RRID:Addgene_58378 Copy
Species: Danio rerio
Genetic Insert: birA EGFP
Vector Backbone Description: Backbone Marker:Kawakami; Backbone Size:6208; Vector Backbone:pT2KXIGdeltaIn; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:25231762
Comments: Note: Addgene's quality control sequencing has found some discrepancies with the depositor's uploaded sequence. The depositing lab is aware of these differences, and they are not thought to affect plasmid function.
Proper citation: RRID:Addgene_58377 Copy
Species: Danio rerio
Genetic Insert: avi-EGFP-rpl10a
Vector Backbone Description: Backbone Marker:Kawakami; Backbone Size:6173; Vector Backbone:pT2KXIGdeltaIn; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:25231762
Comments: Note: Addgene's quality control sequencing has found some discrepancies with the depositor's uploaded sequence. The depositing lab is aware of these differences, and they are not thought to affect plasmid function.
Proper citation: RRID:Addgene_58380 Copy
Species: Danio rerio
Genetic Insert: zebrafish lymphocyte-specific protein tyrosine kinase (lck) promoter, 5.5 kb
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:4777; Vector Backbone:pDONR P4-P1R; Vector Types:Gateway 5' entry clone; Bacterial Resistance:Kanamycin
Proper citation: RRID:Addgene_58890 Copy
Species: Danio rerio
Genetic Insert: elavl3 promoter
Vector Backbone Description: Vector Backbone:MiniTol2; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:25068735
Comments: Addgene NGS QC analysis identified multiple variants in the HuC promoter sequence.
Proper citation: RRID:Addgene_59531 Copy
Species: Danio rerio
Genetic Insert: elavl3 promoter
Vector Backbone Description: Vector Backbone:MiniTol2; Vector Types:Transposable element; Bacterial Resistance:Ampicillin
Defining Citation: PMID:25068736
Comments: Addgene NGS QC analysis identified multiple variants in the HuC promoter sequence.
Proper citation: RRID:Addgene_59530 Copy
Species: Danio rerio
Genetic Insert: HSPB15
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:3950; Vector Backbone:pCRII; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:18161059
Comments: linearize with NotI, transcribe with SP6, probe length is 556.
Proper citation: RRID:Addgene_61039 Copy
Species: Danio rerio
Genetic Insert: HSPB9
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:3950; Vector Backbone:pCRII; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:18161059
Comments: linearize with NotI, transcribe with SP6, probe length is 556.
Proper citation: RRID:Addgene_61038 Copy
Species: Danio rerio
Genetic Insert: HSPB12
Vector Backbone Description: Vector Backbone:pCRII; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:18161059
Comments: linearize with NotI, transcribe with SP6, probe length is 523.
Note: Addgene's quality control sequencing has found a few mismatches in the plasmid insert, but they should not affect its ability to be used as a probe.
Proper citation: RRID:Addgene_61037 Copy
Can't find your Plasmid?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific plasmid, it's easier to enter an RRID or an Addgene Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your plasmid in the search results, please help us by registering it into the system — it's easy. Register it with Addgene.
Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within RRID that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
