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  • Organism:danio rerio (facet)


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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Record Last Update Mentions Count
pME-Cavin4b_PRDmt
 
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RRID:Addgene_176017 Cavin4b (PRDmt) Danio rerio Kanamycin PMID:34633413 Backbone Marker:Invitrogen; Vector Backbone:pDONR221; Vector Types:Gateway Cloning; Bacterial Resistance:Kanamycin 2026-08-15 01:10:54 0
Cavin4a-mCherry
 
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RRID:Addgene_176010 Cavin4a Danio rerio Ampicillin PMID:34633413 Vector Backbone:pCSDEST2 (Addgene 22424); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:10:54 0
Cavin4b-mCherry
 
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RRID:Addgene_176008 Cavin4b Danio rerio Ampicillin PMID:34633413 Vector Backbone:pCSDEST2 (Addgene 22424); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:10:54 0
SITS-mCherry-Bin1a
 
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RRID:Addgene_176024 Bin1a Danio rerio Ampicillin PMID:34633413 Vector Backbone:SITS-mCherry-ccdb (Addgene 118629); Vector Types:Leishmania cell free expression; Bacterial Resistance:Ampicillin 2026-08-15 01:10:54 0
SITS-EGFP-Bin1a
 
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RRID:Addgene_176020 Bin1a Danio rerio Ampicillin PMID:34633413 Vector Backbone:SITS-EGFP-ccdb (Addgene 118628); Vector Types:Leishmania cell free expression; Bacterial Resistance:Ampicillin 2026-08-15 01:10:54 0
Tg(mpeg1:LifeAct-mRuby)
 
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1+ mentions
RRID:Addgene_166977 mpeg1 Danio rerio Ampicillin PMID:28972134 Backbone Size:3500; Vector Backbone:Tol2; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:09:40 2
pCS2-zfCSF3b
 
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RRID:Addgene_168202 Csf3b Danio rerio Ampicillin PMID:24128862 Backbone Size:4095; Vector Backbone:pCS2+; Vector Types:Mammalian Expression, Vertebrate expression (zebrafish, chicken, xenopus); Bacterial Resistance:Ampicillin 2026-08-15 01:09:51 0
Tol2-LyzC-GFP-U6ac-cdk2-guides
 
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RRID:Addgene_168250 cdk2 sgRNAs Danio rerio Ampicillin PMID:33722979 Vector Backbone:R4R3 pDest; Vector Types:CRISPR; Bacterial Resistance:Ampicillin 2026-08-15 01:09:51 0
pBluescript Sp5
 
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RRID:Addgene_16884 sp5 Danio rerio Ampicillin PMID:11641225 Zebrafish sp5 (bts1) cDNA Full-length in pBluescript SK, cloned into EcoRI / XhoI. Useful for making antisense probe. Is the paralog of sp5-like (sp5l, clone 27-i2 from the Wnt8 upregulated microarray screen). The clone comes from library screening (library from Bruce Appel) and the library was constructed using EcoRI and XhoI linkers; The library was made into the Uni-ZAP XR Lambda vector, and from it Bluescript SK was excised. Backbone Marker:Stratagene; Backbone Size:3000; Vector Backbone:pBluescript SK; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:09:56 0
ZP59 23f17
 
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RRID:Addgene_16883 23f17 Danio rerio Ampicillin PMID:15797017 Clone 23f17 from the microarray screen 1st round (Matthew clark normalized late somitogenesis / 24 hpf / liver library). Noncoding, repetitive transcript. Similar and overlapping with many other regions in the genome. For antisense probe synthesis. Expressed in paraxial and ventral mesoderm during gastrulation. Later in specific brain regions. For antisense: EcoRI, SP6. Citation: G Weidinger and R. T. Moon (2005). Development. Backbone Size:4100; Vector Backbone:pSPORT1; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:09:56 0
ZP60 Axin2
 
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RRID:Addgene_16882 axin2 Danio rerio Ampicillin PMID:15797017 Zebrafish axin2 cDNA (unclear if full-length or not) in pSPORT1. Clone 24h4 from microarray screen 1st round (Matthew Clark normalized late somitogenesis / 24 hpf / liver library). For antisense probe synthesis. Pretty ubiquitously expressed during gastrulation. Positively regulated by Wnt signaling. For antisense: Asp718, SP6. Citation: G Weidinger and R. T. Moon (2005). Development. Backbone Size:4100; Vector Backbone:pSPORT1; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:09:56 0
ZP44 Wnt8 5' orf2
 
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RRID:Addgene_16898 wnt8 5'orf2 Danio rerio Ampicillin 588 bp PCR product ligated into BamHI and EcoRI cut pSK+. For probe: cut with BamHI, use T7 RNA polymerase. Backbone Marker:Stratagene; Backbone Size:3000; Vector Backbone:pBluescript SK+; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:09:56 0
ZP45 Prickle-1
 
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RRID:Addgene_16897 Prickle-1 Danio rerio Ampicillin PMID:12699626 Full length prickle-1 with 42bp of 5' UTR, cloned into pGEM-Teasy. The construct makes good in situ probes but does not translate in vitro due to an atg in the polylinker. To make antisense probe: cut with Nco1, transcribe with SP6. For the sense strand cut with Nde1 and transcribe with T7. Citation: Michael T. Veeman et al., Current Biology 13: 680-685 (2003). Backbone Marker:Promega; Backbone Size:3000; Vector Backbone:pGEM-T easy; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:09:56 0
ZP46 Prickle-2
 
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RRID:Addgene_16896 Prickle-2 Danio rerio Ampicillin PMID:12699626 Partial length prickle-2, contains the entire protein except the last 75 amino acids (predicted). Cloned into the BamH1 and Cla1 sites of CS2P+. To make antisense probe: cut with BamH1, transcribe with T7. For the sense strand cut with Cla1 and transcribe with SP6. Citation: Michael T. Veeman et al., Current Biology 13: 680-685 (2003). Backbone Size:0; Vector Backbone:CS2P+; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:09:56 0
Tol2-aACry::EGFP-zebrafish Plaat1 (WT)
 
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RRID:Addgene_168772 Hrasls Danio rerio Ampicillin PMID:33854238 Vector Backbone:Tol2-aACry; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:09:55 0
pVC-Ds-E1b:eGFP-Ds
 
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1+ mentions
RRID:Addgene_102417 E1b:eGFP Danio rerio Ampicillin PMID:37367831 A. Emelyanov and S. Parinov. Mifepristone-inducible LexPR system to drive and control gene expression in transgenic zebrafish. Developmental Biology, 320(1):113– 121, 2008. ISSN 00121606. doi: 10.1016/j.ydbio.2008.04.042. A. Emelyanov, Y. Gao, N. I. Naqvi, and S. Parinov. Trans-kingdom transposition of the maize Dissociation element. Genetics, 174(3):1095–1104, 2006. ISSN 00166731. doi: 10.1534/genetics.106.061184. Please visit https://www.biorxiv.org/content/10.1101/450684v2 for bioRxiv preprint. Backbone Size:3873; Vector Backbone:Unknown; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:00:24 1
pZL1-ZF - myelin basic protein a (mbpa)
 
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RRID:Addgene_103007 myelin basic protein Danio rerio Ampicillin PMID:12112375 Backbone Size:4308; Vector Backbone:pZL1; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:00:28 0
pDONR221-kcnj2a
 
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RRID:Addgene_173127 kcnj2a Danio rerio Kanamycin PMID:34558132 This gene was cloned from a pool of mixed zebrafish embryos (1-3dpf) using RT-PCR. Backbone Marker:Invitrogen; Backbone Size:2550; Vector Backbone:pDONR221; Vector Types:PCR cloning vector; Bacterial Resistance:Kanamycin 2026-08-15 01:10:30 0
pENTR-D-kcnj1b
 
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RRID:Addgene_173126 kcnj1b Danio rerio Kanamycin PMID:34558132 This gene was cloned from a pool of mixed zebrafish embryos (1-3dpf) using RT-PCR. Backbone Marker:Invitrogen; Backbone Size:2580; Vector Backbone:pENTR-D-Topo; Vector Types:PCR cloning vector; Bacterial Resistance:Kanamycin 2026-08-15 01:10:30 0
pENTR-D-kcnj15
 
Resource Report
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RRID:Addgene_173145 kcnj15 Danio rerio Kanamycin PMID:34558132 This gene was cloned from a pool of mixed zebrafish embryos (1-3dpf) using RT-PCR. Backbone Marker:Invitrogen; Backbone Size:2580; Vector Backbone:pENTR-D-Topo; Vector Types:PCR cloning vector; Bacterial Resistance:Kanamycin 2026-08-15 01:10:31 0

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