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Genetic Insert: TadA-CDd-32aa linker-zSpCas9-D10A-2xUGI
Vector Backbone Description: Vector Backbone:pYPQ166; Vector Types:Plant Expression, CRISPR, Gateway compatible TadA-CDd-32aa linker-zSpCas9-D10A-2xUGI entry clone; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38877035
Comments: Please visit https://doi.org/10.1101/2024.02.25.581917 for bioRxiv preprint.
Proper citation: RRID:Addgene_213470 Copy
Species: Synthetic
Genetic Insert: mNeonGreen
Vector Backbone Description: Vector Backbone:pLEU; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Contains a minimal CYC1 promoter driving expression of mNeonGreen. Binding sites for ZF-1 (ZF 43-8) are upstream of the promoter. Cut with NotI prior to transformation into yeast to facilitate genomic insertion.
** This plasmid is prone to recombination due to ZF binding site repeats.**
Proper citation: RRID:Addgene_213840 Copy
Species: Synthetic
Genetic Insert: mNeonGreen
Vector Backbone Description: Vector Backbone:pLEU; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Contains a minimal CYC1 promoter driving expression of mNeonGreen. Binding sites for ZF-2 (ZF 42-10) are upstream of the promoter. Cut with NotI prior to transformation into yeast to facilitate genomic insertion.
**This plasmid is prone to recombination due to ZF binding site repeats.**
Proper citation: RRID:Addgene_213841 Copy
Species: Synthetic
Genetic Insert: VP16
Vector Backbone Description: Vector Backbone:self-made; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Contains one aTc-inducible promoter variants driving the expression of VP-16 fused to ZF-1 (ZF-43-8).
**This plasmid is prone to recombination due to repeats in the aTc-inducible promoters.**
Proper citation: RRID:Addgene_213843 Copy
Vector Backbone Description: Vector Backbone:self-made; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Storage plasmid for type 1 expression vectors -- i.e., fusions to ZF-1 (ZF 43-8).
To insert barcoded genes:
i) digest this plasmid with BbsI and MfeI
ii) digest the barcoded gene with BsaI -- making sure the resultant overhangs match the BbsI and MfeI sites
iii) ligate the two digestion products.
Terminators can be added to the barcoded ligation product via a BbsI golden gate reaction.
Proper citation: RRID:Addgene_213844 Copy
Vector Backbone Description: Vector Backbone:self-made; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Storage plasmid for type 1 expression vectors -- i.e., fusions to ZF-2 (ZF 42-10).
To insert barcoded genes:
i) digest this plasmid with BbsI and MfeI
ii) digest the barcoded gene with BsaI -- making sure the resultant overhangs match the BbsI and MfeI sites
iii) ligate the two digestion products.
Terminators can be added to the barcoded ligation product via a BbsI golden gate reaction.
Proper citation: RRID:Addgene_213845 Copy
Species: Synthetic
Genetic Insert: mNeonGreen
Vector Backbone Description: Vector Backbone:pLEU; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Contains a minimal CYC1 promoter driving expression of mNeonGreen. No ZF binding sites are present.
Cut with NotI prior to transformation into yeast to facilitate genomic insertion.
Proper citation: RRID:Addgene_213838 Copy
Species: Synthetic
Genetic Insert: mNeonGreen, mCherry
Vector Backbone Description: Vector Backbone:self-made; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Contains two aTc-inducible variants driving the expression of mNeonGreen and mCherry.
**This plasmid is prone to recombination due to repeats in the aTc-inducible promoters.**
Proper citation: RRID:Addgene_213839 Copy
Species: Synthetic
Genetic Insert: mNeonGreen
Vector Backbone Description: Vector Backbone:pLEU; Vector Types:Yeast Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:38906116
Comments: Contains a minimal CYC1 promoter driving expression of mNeonGreen. Binding sites for ZF-1 (ZF 43-8) are upstream of the promoter and ZF-2 (ZF 42-10) binding sites are downstream.
Cut with NotI prior to transformation into yeast to facilitate genomic insertion.
**This plasmid is prone to recombination due to ZF binding site repeats.**
Proper citation: RRID:Addgene_213835 Copy
Species: Other
Genetic Insert: KDEL
Vector Backbone Description: Vector Backbone:pDONR223; Vector Types:Gateway Cloning; Bacterial Resistance:Spectinomycin
Proper citation: RRID:Addgene_215002 Copy
Species: Rattus norvegicus
Genetic Insert: MAP1LC3B
Vector Backbone Description: Vector Backbone:pDONR223; Vector Types:Gateway Cloning; Bacterial Resistance:Spectinomycin
Proper citation: RRID:Addgene_215004 Copy
Species: Synthetic
Genetic Insert: SF-LUZ-H3H-EGFP-p19
Vector Backbone Description: Backbone Marker:self-made; derived from pCambia1302 generated at the Cambia Institute; Vector Backbone:pDGB3_omega2; Vector Types:Synthetic Biology; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:37882352
Proper citation: RRID:Addgene_215257 Copy
Species: Synthetic
Genetic Insert: MAR10-SF-nptII-LUZ-CPH-MAR10-SF
Vector Backbone Description: Backbone Marker:self-made; derived from pCambia1302 generated at the Cambia Institute; Vector Backbone:pDGB3_omega1; Vector Types:Synthetic Biology; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:37882352
Proper citation: RRID:Addgene_215270 Copy
Species: Synthetic
Genetic Insert: MGGAGM Linker
Vector Backbone Description: Vector Backbone:pGWB502-omega; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:39100877
Comments: Please visit https://www.biorxiv.org/content/10.1101/2024.06.28.601222v1.full for bioRxiv preprint.
Proper citation: RRID:Addgene_216141 Copy
Species: Arabidopsis thaliana
Genetic Insert: MPK12
Vector Backbone Description: Vector Backbone:pGWB502-omega; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:39100877
Comments: Please visit https://www.biorxiv.org/content/10.1101/2024.06.28.601222v1.full for bioRxiv preprint.
Proper citation: RRID:Addgene_216139 Copy
Species: Arabidopsis thaliana
Genetic Insert: MPK5
Vector Backbone Description: Vector Backbone:pGWB502-omega; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:39100877
Comments: Addgene NGS results found E483G mutation in insert ORF that does not impact plasmid function.
Please visit https://www.biorxiv.org/content/10.1101/2024.06.28.601222v1.full for bioRxiv preprint.
Proper citation: RRID:Addgene_216136 Copy
Species: Homo sapiens
Genetic Insert: STXBP1
Vector Backbone Description: Backbone Marker:GenScript; Backbone Size:2800; Vector Backbone:pCR8-GW-TOPO; Vector Types:Gateway Cloning; Bacterial Resistance:Spectinomycin
Comments: insert contains a Kozak sequence that encodes a linker for cloning into N-terminal tagging pDEST vectors
Proper citation: RRID:Addgene_216624 Copy
Species: Homo sapiens
Genetic Insert: YAP1 WT
Vector Backbone Description: Vector Backbone:pDONR; Vector Types:Unspecified; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:35170430
Proper citation: RRID:Addgene_184524 Copy
Species: Synthetic
Genetic Insert: mCherry
Vector Backbone Description: Vector Backbone:CloCDF; Vector Types:Bacterial Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:33834762
Comments: Please visit https://www.biorxiv.org/content/10.1101/529180v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_139134 Copy
Species: Synthetic
Genetic Insert: mCherry
Vector Backbone Description: Vector Backbone:CloCDF; Vector Types:Bacterial Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:33834762
Comments: Please visit https://www.biorxiv.org/content/10.1101/529180v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_139137 Copy
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