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Plasmids are provided by Addgene and DGRC.

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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Record Last Update Mentions Count
pGEX-5x3-hMeCP2-delN256-R270X
 
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RRID:Addgene_48089 Methyl-CpG Binding Protein 2 (Rett Syndrome) Homo sapiens Ampicillin PMID:23452848 Backbone Size:4974; Vector Backbone:pGEX-5x3; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin deleted the N-terminal 256 codons, expresses AT-Hook R270X 2026-08-15 01:15:47 0
pAC152-dual-dCas9VP64-sgExpression
 
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1+ mentions
RRID:Addgene_48238 dCas9 Synthetic Ampicillin PMID:23979020 Clone sgRNA spacer into BbsI site. Sequence using LKO5' primer: GACTATCATATGCTTACCGT For more information including protocols and updates, please go to http://www.crispr-on.org Vector Backbone:pX335 (Addgene #42335); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin D10A;H840A 2026-08-15 01:15:48 3
pDONR P4-P1R-EYFP
 
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RRID:Addgene_48350 EYFP Synthetic Kanamycin PMID:23957834 Backbone Marker:Life Technologies/Invitrogen; Backbone Size:2655; Vector Backbone:pDONRP4-P1R; Vector Types:Gateway Cloning; Bacterial Resistance:Kanamycin Contains a Kozak sequence. Does not contain a stop codon. 2026-08-15 01:15:49 0
IpO
 
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1+ mentions
RRID:Addgene_48233 URA3 3' fragment Saccharomyces cerevisiae Ampicillin PMID:24604451 Backbone Marker:Agilent Technologies; Backbone Size:2961; Vector Backbone:pBluescript II SK (-); Vector Types:Routine cloning vector; Bacterial Resistance:Ampicillin URA3 ORF from +216 to 80 bp downstream of the stop codon 2026-08-15 01:15:48 1
pAC94-pmax-dCas9VP160-2A-puro
 
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1+ mentions
RRID:Addgene_48226 dCas9(D10A;H840A) fusion with VP160 activation domain followed by 2A-puro Homo sapiens Kanamycin PMID:23979020 For more information including protocols and updates, please go to http://www.crispr-on.org Vector Backbone:pmax-DEST (Addgene: 48222); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Kanamycin D10A;H840A (catalytically inactive) 2026-08-15 01:15:48 9
pAC95-pmax-dCas9VP160-2A-neo
 
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1+ mentions
RRID:Addgene_48227 dCas9(D10A;H840A) fusion with VP160 activation domain followed by 2A-neo Homo sapiens Kanamycin PMID:23979020 For more information including protocols and updates, please go to http://www.crispr-on.org Vector Backbone:pmax-DEST (Addgene: 48222); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Kanamycin D10A;H840A (catalytically inactive) 2026-08-15 01:15:48 8
pDONR P4-P1R-EGFP
 
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RRID:Addgene_48348 EGFP Synthetic Kanamycin PMID:23957834 Backbone Marker:Life Technologies/Invitrogen; Backbone Size:2655; Vector Backbone:pDONRP4-P1R; Vector Types:Gateway Cloning; Bacterial Resistance:Kanamycin Contains a Kozak sequence. Does not contain a stop codon. Aminoacid 40 is valine in our sequence, while it is phenylalanine in other EGFP sequences. This does not seem to affect fluorescence. 2026-08-15 01:15:49 0
pAC92-pmax-dCas9VP96
 
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RRID:Addgene_48224 dCas9(D10A;H840A) fusion with VP96 activation domain Homo sapiens Kanamycin PMID:23979020 For more information including protocols and updates, please go to http://www.crispr-on.org Vector Backbone:pmax-DEST (Addgene: 48222); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Kanamycin D10A;H840A 2026-08-15 01:15:48 0
pDONR P2R-P3-mKate2
 
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1+ mentions
RRID:Addgene_48345 mKate2 Synthetic Kanamycin PMID:23957834 Backbone Marker:Life Technologies/Invitrogen; Backbone Size:2639; Vector Backbone:pDONRP2R-P3; Vector Types:Gateway Cloning; Bacterial Resistance:Kanamycin Contains a stop codon at the 3' end of the coding sequence. 2026-08-15 01:15:49 3
pAC93-pmax-dCas9VP160
 
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1+ mentions
RRID:Addgene_48225 dCas9(D10A;H840A) fusion with VP160 activation domain Homo sapiens Kanamycin PMID:23979020 For more information including protocols and updates, please go to http://www.crispr-on.org Vector Backbone:pmax-DEST (Addgene: 48222); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Kanamycin D10A;H840A (catalytically inactive) 2026-08-15 01:15:48 6
pDONR P4-P1R-V5-6xHis
 
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RRID:Addgene_48346 V5 and 6xHis epitope tags cassette Synthetic Kanamycin PMID:23957834 Backbone Marker:Life Technologies/Invitrogen; Backbone Size:2645; Vector Backbone:pDONRP4-P1R; Vector Types:Gateway Cloning; Bacterial Resistance:Kanamycin Contains a Kozak sequence and initiation codon upstream of V5 tag. Does not contain a stop codon. 2026-08-15 01:15:49 0
pAC103-PBNeo-U6-sgRNA-Expression
 
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RRID:Addgene_48228 Ampicillin PMID:23979020 For more information including protocols and updates, please go to http://www.crispr-on.org Backbone Marker:Invitrogen; Vector Backbone:pCR4; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin 2026-08-15 01:15:48 0
pAC91-pmax-dCas9VP64
 
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1+ mentions
RRID:Addgene_48223 dCas9(D10A;H840A) fusion with VP64 activation domain Homo sapiens Kanamycin PMID:23979020 For more information including protocols and updates, please go to http://www.crispr-on.org Vector Backbone:pmax-DEST (Addgene: 48222); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Kanamycin D10A;H840A (catalytically inactive) 2026-08-15 01:15:48 2
pDONR P4-P1R-mKate2
 
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RRID:Addgene_48344 mKate2 Synthetic Kanamycin PMID:23957834 Backbone Marker:Life Technologies/Invitrogen; Backbone Size:2646; Vector Backbone:pDONRP4-P1R; Vector Types:Gateway Cloning; Bacterial Resistance:Kanamycin It contains a Kozak sequence but no stop codon. 2026-08-15 01:15:49 0
pAC149-pCR8-dCas9VP160
 
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1+ mentions
RRID:Addgene_48221 dCas9(D10A;H840A) fusion with VP160 activation domain Homo sapiens Spectinomycin PMID:23979020 For more information including protocols and updates, please go to http://www.crispr-on.org Backbone Marker:Invitrogen; Backbone Size:2799; Vector Backbone:pCR8/GW/TOPO; Vector Types:CRISPR, Gateway Cloning; Bacterial Resistance:Spectinomycin D10A;H840A nuclease-deficient 2026-08-15 01:15:48 1
pTrex-Luc-Neo
 
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RRID:Addgene_48336 firely luciferase Photinus pyralis Ampicillin PMID:29578409 Backbone Marker:Martin P. Vazquez; Backbone Size:6200; Vector Backbone:pTrex; Vector Types:Trypanasoma cruzi expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:49 0
pTrex-Luc-Phleo
 
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1+ mentions
RRID:Addgene_48337 firely luciferase Photinus pyralis Ampicillin PMID:20644616 Backbone Marker:Martin P. Vazquez; Backbone Size:6200; Vector Backbone:pTrex; Vector Types:Trypanasoma cruzi expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:49 2
5HT6-YC3.60
 
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RRID:Addgene_48339 5-hydroxytriptamine receptor isoform 6 Mus musculus Ampicillin PMID:24056873 Backbone Size:5300; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:49 0
pET MYFQSNA tagged cloning vector with BioBrick polycistronic restriction sites (9U)
 
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RRID:Addgene_48293 Ampicillin This plasmid is an empty vector to be used with a LIC cloning protocol. It has a MYFQSNA fusion tag on the N-terminus To clone into this vector, add LIC fusion tags to the 5' end of your PCR primers. Forward - 5'TACTTCCAATCCAATGCA3' Reverse - 5'TTATCCACTTCCAATGTTATTA3' Linearize the plasmid with SspI and gel purify.When digesting the DNA with T4 polymerase for LIC, use dCTP for insert and dGTP for vector. Series 9 vectors have BioBrick restriction sites to facilitate subcloning reactions to make polycistronic expression vectors. NotI, PacI, AsiSI, and SbfI are the restriction enzyme sites that flank your open reading frame. More information on this vector can be found through http://qb3.berkeley.edu/qb3/macrolab/ Note: The plasmid as it is provided enocdes "MYFQSNI". However, the vector is supposed to be cut with SspI (AATATT), which is a blunt cutter that cuts between the N and the "I" (this ends up not being transcribed, however). Then, provided you use the LIC tags on your PCR primers that we've suggested, the forward primer will introduce an A residue immediately downstream of the N. The final tag, therefore, is MYFQSNA. Backbone Size:4729; Vector Backbone:pET; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:49 0
Gal1/10 His6-MBP TEV Ade S. cerevisiae expression vector (12ADE-C)
 
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RRID:Addgene_48299 Ampicillin Note: The full plasmid sequence displayed here is theoretical and may not be entirely accurate. Addgene's quality control sequencing has identified some discrepancies with the sequence, but they do not impact the plasmid's function. This plasmid is a LIC-adapted S. cerevisiae vector. It uses the same PCR primer tags as with most of our other vectors, so one PCR product can be inserted into many different vectors at once. This vector has a TEV cleavable His6-MBP tag on the N-terminus and can complement Ade auxotrophy. Add the following tags to your PCR primers: LicV1 Forward Tag TACTTCCAATCCAATGCA(ATG) LicV1 Reverse Tag TTATCCACTTCCAATGTTATTA Linearize this plasmid with SspI and gel purify the product, then T4-treat with dGTP. For the PCR product, T4-treat with dCTP. Series 12 vectors are galactose inducible (using the Gal 1/10 promoter). The plasmids are cloned and propagated in E. coli. Plasmids are available to complement the Ade, Trp, or Ura auxotrophies. The Ade, Trp, and Ura plasmids can co-exist in the same yeast cell with no compatibility issues. We have successfully expressed 3 proteins from these 3 plasmids in the same strain (BCY123: Ade-, Trp-, Ura-). For more information, please see our website: http://qb3.berkeley.edu/qb3/macrolab/ Backbone Size:9643; Vector Backbone:pRS422; Vector Types:NA; Bacterial Resistance:Ampicillin 2026-08-15 01:15:49 0

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