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Species: Synthetic
Genetic Insert: sfGFP
Vector Backbone Description: Backbone Marker:Hyung-song Nam, Capecchi laboratory; Vector Backbone:Custom; Vector Types:Mammalian Expression, Cre/Lox; Bacterial Resistance:Ampicillin
Proper citation: RRID:Addgene_172476 Copy
Species: Homo sapiens
Genetic Insert: Bmf
Vector Backbone Description: Backbone Marker:Available from Addgene (#1767); Backbone Size:5330; Vector Backbone:pBabe-neo; Vector Types:Mammalian Expression, Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:17360431
Proper citation: RRID:Addgene_17239 Copy
Species: Synthetic
Genetic Insert: tdKatushka2-PBD(Pak1)-EVlinker-Cdc42-tdTomato-CAAX
Vector Backbone Description: Backbone Size:6785; Vector Backbone:pPB; Vector Types:Mammalian Expression, Piggybac transposon; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34785668
Comments: This sensor is based on the design of the Matsuda lab (https://www.ncbi.nlm.nih.gov/pubmed/21976697), but modified to use tdTomato as the FRET donor and tdKatushka as the FRET acceptor. The tdKatushka2 was originally cloned by Michael Davidson's lab (Addgene plasmid #56049).
Proper citation: RRID:Addgene_172473 Copy
Species: Danio rerio
Genetic Insert: prolactinSS-PP1-mCitrine
Vector Backbone Description: Backbone Size:8740; Vector Backbone:pLenti 2nd gen; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34785668
Proper citation: RRID:Addgene_172472 Copy
Genetic Insert: wbp2nl
Vector Backbone Description: Backbone Size:4300; Vector Backbone:pCS2+; Vector Types:Xenopus Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:28663133
Comments: we cloned this plasmid
Please note: Plasmid contains a ~70bp discrepancy in the CMV IE94 promoter compared to the pCS2+ backbone sequence. It is not known how this discrepancy affects plasmid function.
Proper citation: RRID:Addgene_172467 Copy
Species: Homo sapiens
Genetic Insert: Bmf
Vector Backbone Description: Backbone Marker:Available from Addgene (#1767); Backbone Size:5330; Vector Backbone:pBabe-neo; Vector Types:Mammalian Expression, Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:17360431
Proper citation: RRID:Addgene_17240 Copy
Species: Mus musculus
Genetic Insert: Bmf
Vector Backbone Description: Backbone Marker:Available from Addgene (#1767); Backbone Size:5330; Vector Backbone:pBabe-neo; Vector Types:Mammalian Expression, Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:17360431
Proper citation: RRID:Addgene_17241 Copy
Species: Caenorhabditis elegans
Genetic Insert: unc-119 rescue fragment in pDESTR4R3
Vector Backbone Description: Backbone Size:4115; Vector Backbone:pDESTR4R3; Vector Types:Gateway Cloning; Bacterial Resistance:Chloramphenicol and Ampicillin
Defining Citation: PMID:18818082
Proper citation: RRID:Addgene_17247 Copy
Species: Caenorhabditis elegans
Genetic Insert: GFP:H2B from pKS111-His in pDONR201
Vector Backbone Description: Backbone Size:2257; Vector Backbone:pDONR201; Vector Types:Gateway Cloning; Bacterial Resistance:Kanamycin
Defining Citation: PMID:18818082
Proper citation: RRID:Addgene_17248 Copy
Species: Xenopus laevis
Genetic Insert: wbp2nlT45A
Vector Backbone Description: Backbone Size:4100; Vector Backbone:pCS2+; Vector Types:Xenopus Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:28663133
Comments: we cloned this plasmid
Proper citation: RRID:Addgene_172464 Copy
Species: Homo sapiens
Genetic Insert: TPD53
Vector Backbone Description: Backbone Marker:Addgene 45567; Vector Backbone:pIRES-EGFP-Puro; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34287617
Proper citation: RRID:Addgene_172461 Copy
Species: Homo sapiens
Genetic Insert: TPD52
Vector Backbone Description: Backbone Marker:Addgene 45567; Vector Backbone:pIRES-EGFP-Puro; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34287617
Proper citation: RRID:Addgene_172460 Copy
Species: Danio rerio
Genetic Insert: -3.5ubb:plin2-tdtomato
Vector Backbone Description: Backbone Size:7011; Vector Backbone:pDestTol2pA2-Blasticidin; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34114952
Comments: Please note that the Addgene verified sequence identified S80R, A81S, E144D, I148F, and R415H mutations in PLIN2-tdTomato. These mutations are not known to affect plasmid function.
Proper citation: RRID:Addgene_172535 Copy
Species: Mus musculus
Genetic Insert: PDCD4
Vector Backbone Description: Backbone Marker:Toshi Kitamura at University of Tokyo; Backbone Size:5800; Vector Backbone:pMXs-IP; Vector Types:Mammalian Expression, Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33431855
Proper citation: RRID:Addgene_172496 Copy
Species: Danio rerio
Genetic Insert: cct3-GFP
Vector Backbone Description: Backbone Marker:Joachim Berger; Backbone Size:6353; Vector Backbone:pDESTtol2pACrymCherry; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:29320728
Proper citation: RRID:Addgene_172528 Copy
Species: Mus musculus
Genetic Insert: Mr1
Vector Backbone Description: Vector Backbone:LentiCRISPRv2-mCherry; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34193462
Proper citation: RRID:Addgene_172525 Copy
Species: Synthetic
Genetic Insert: bdSUMO-LbuCas13a (codon-optimized)
Vector Backbone Description: Vector Backbone:pET-28a(+); Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:34354262
Comments: Please visit https://www.medrxiv.org/content/10.1101/2021.03.19.21253328v1 for medRxiv preprint.
Proper citation: RRID:Addgene_172488 Copy
Species: Synthetic
Genetic Insert: Enterococcus italicus Csm6 (codon optimized)
Vector Backbone Description: Vector Backbone:pET28a; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:34354262
Comments: Genscript synthesized the EiCsm6 gene fragment and cloned it into the pET28a vector.
Please visit https://www.medrxiv.org/content/10.1101/2021.03.19.21253328v1 for medRxiv preprint.
Proper citation: RRID:Addgene_172487 Copy
Species: Other
Genetic Insert: Bighead.S
Vector Backbone Description: Vector Backbone:pCS2; Vector Types:in vitro mRNA synthesis; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30209221
Proper citation: RRID:Addgene_172485 Copy
Species: Synthetic
Genetic Insert: LuxR-mRFP
Vector Backbone Description: Backbone Marker:Novagen; Vector Backbone:original Duet vector; Vector Types:Bacterial Expression, Synthetic Biology; Bacterial Resistance:Streptomycin
Proper citation: RRID:Addgene_172557 Copy
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